PhysiCell Studio is a graphical tool to allow easy editing of a (XML) model, create initial positions of cells, run a simulation, and visualize results. To contribute, fork and make PRs to the development branch.
☆37Feb 26, 2026Updated this week
Alternatives and similar repositories for PhysiCell-Studio
Users that are interested in PhysiCell-Studio are comparing it to the libraries listed below
Sorting:
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆30Updated this week
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆196Feb 11, 2026Updated 2 weeks ago
- 2022 PhysiCell Hackathon and Workshop☆12Jul 29, 2022Updated 3 years ago
- Repository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper☆11Dec 2, 2025Updated 3 months ago
- A web tool for exploring large maps of molecular interactions☆11Updated this week
- A collection of 280+ Boolean networks from various sources useful for benchmarking or testing.☆18Jan 13, 2026Updated last month
- Sample models for the PhysiCell grammar / rules paper☆30Jul 21, 2025Updated 7 months ago
- Fast reconstruction of spatial networks from bioimages.☆25Apr 25, 2025Updated 10 months ago
- RNA velocity validation☆22Mar 16, 2022Updated 3 years ago
- Multiscale simulation of multi-cellular system☆28Jul 31, 2020Updated 5 years ago
- GPI-Space: Memory Driven Computing and Big Data☆10Jan 2, 2025Updated last year
- ☆13Mar 10, 2019Updated 6 years ago
- R package to analyze single cell DNA sequencing data.☆10Jan 28, 2026Updated last month
- Demo repository showcasing how to use reusable workflows to build artifact attestations☆14Feb 16, 2026Updated 2 weeks ago
- Self-evaluating RAG application on LangCheck docs☆11Sep 10, 2025Updated 5 months ago
- ⛅ WorldClim in NetLogo☆18Updated this week
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.