Alternatives and similar repositories for ws2022

Users that are interested in ws2022 are comparing it to the libraries listed below

• BuildACell / liposome-kit
  Build-A-Cell protocol for making liposomes
  ☆13Updated 2 years ago
• tlubitz / parameter_balancing
  Software tool for metabolic modelling in Systems Biology
  ☆10Updated 5 years ago
• evanpeikon / Mouse_Alz_Models
  Exploring mutual features between the 5xFAD, 3xTG-AD, and PS3O1S Alzheimer's Disease Mouse Models
  ☆11Updated last year
• biocircuits / bioscrape
  BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)
  ☆29Updated 10 months ago
• KarrLab / intro_to_wc_modeling
  Whole-cell modeling tutorials
  ☆16Updated 5 years ago
• msneddon / nfsim
  A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
  ☆19Updated last year
• phievo / phievo
  Software for in silico evolution - Paul François' group McGill University
  ☆10Updated 3 years ago
• msmdev / pyGPCCA
  pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…
  ☆26Updated 9 months ago
• tissue-forge / tissue-forge
  Interactive, particle-based physics, chemistry and biology modeling and simulation environment
  ☆23Updated 6 months ago
• EPFL-LCSB / skimpy
  Symbolic Kinetic Models with Python
  ☆34Updated 7 months ago
• MathCancer / PhysiCell
  PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…
  ☆194Updated 3 weeks ago
• kazumits / ddhodge
  Modeling Latent Flow Structure using Hodge Decomposition
  ☆15Updated 10 months ago
• PhysiBoSS / PhysiBoSS
  PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks
  ☆30Updated last week
• PhysiCell-Tools / PhysiCell-Studio
  PhysiCell Studio is a graphical tool to allow easy editing of a (XML) model, create initial positions of cells, run a simulation, and vis…
  ☆37Updated last week
• IntroDataSci / Overview
  ☆12Updated last year
• dwgoon / sfa
  A simulation framework to analyze signal flows in complex networks
  ☆15Updated 2 years ago
• copasi / basico
  A simplified python interface to COPASI.
  ☆25Updated 2 weeks ago
• BlueBrain / BlueCelluLab
  Biologically detailed neural network simulations and analysis API
  ☆14Updated 11 months ago
• flowersteam / sbmltoodejax
  ☆13Updated last year
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆41Updated 10 months ago
• LJPZebra / OLU
  A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design
  ☆13Updated 2 years ago
• RuleWorld / bionetgen
  Rule-based modeling framework
  ☆65Updated 8 months ago
• anders-s-olsen / CopBET
  Copenhagen brain entropy toolbox - a set of matlab tools to compute entropy measures in neuroimaging data
  ☆10Updated last year
• amirpandi / METIS
  METIS: A versatile active learning workflow for optimization of genetic and metabolic networks
  ☆33Updated 3 years ago
• RuleWorld / nfsim
  A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
  ☆14Updated 5 months ago
• davidlevybooth / MBINF-Introduction-to-Python
  MBINF Introduction to Python Workshop 2024
  ☆24Updated last year
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆56Updated 2 years ago
• davidSafeloc / Entanglement-witnessed-in-the-human-brain
  This is the repository containing the MRI files and scripts used to analysed the data
  ☆17Updated 5 years ago
• virtualcell / vcell
  Virtual Cell Framework
  ☆107Updated last week
• dwitvliet / nature2021
  Source code for Witvliet et al., 2021, Nature
  ☆16Updated 4 years ago