Python data loader for PhysiCell digital snapshots
☆10Sep 5, 2026Updated 2 months ago
Alternatives and similar repositories for python-loader
Users that are interested in python-loader are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- python3 based physicell output data transformer.☆11Sep 14, 2026Updated last month
- The goal of this package is to perform uncertainty quantification across the entire input space of PhysiCell models (including parameters…☆10Updated this week
- A repository that stores all the MCP servers for creating biological mechanistic models. It includes server for NeKo, MaBoSS, PhysiCell/P…☆20Oct 28, 2026Updated last week
- PhysiCell Studio is a graphical tool to allow easy editing of a (XML) model, create initial positions of cells, run a simulation, and vis…☆40Oct 11, 2026Updated 3 weeks ago
- 2022 PhysiCell Hackathon and Workshop☆13Jul 29, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆219Oct 2, 2026Updated last month
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆36Updated this week
- MCP server for UniProt protein data access☆14Oct 10, 2026Updated last month
- An online radio station that generates music by playing sounds hosted on Freesound☆15Jun 22, 2025Updated last year
- Multiscale simulation of multi-cellular system☆29Jul 31, 2020Updated 6 years ago
- 2021 PhysiCell Workshop and Hackathon☆11Aug 4, 2021Updated 5 years ago
- Tired of check-in/out with Woffu? I'll do it for you :)☆10Sep 9, 2019Updated 7 years ago
- Sample models for the PhysiCell grammar / rules paper☆35Jul 21, 2025Updated last year
- Applying deep learning for very early recognition of pluripotent stem cell differentiation☆11Mar 15, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SINDy-SA framework: enhancing nonlinear system identification with sensitivity analysis☆12Apr 24, 2025Updated last year
- Prompt-guided ChatGPT template for generating systematic review search strategies across multiple databases.☆13Aug 2, 2026Updated 3 months ago
- ☆14Aug 6, 2024Updated 2 years ago
- Ultra-large-scale cell-based simulation platform☆10Sep 11, 2023Updated 3 years ago
- Repository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper☆11Dec 2, 2025Updated 11 months ago
- ☆14Feb 24, 2020Updated 6 years ago
- Calculator for hemodynamic parameters using exported Fluent ASCII data. Specifically: TAWSS, OSI, RT, and transWSS.☆10May 25, 2026Updated 5 months ago
- Computational framework for dataset integration☆12Jul 21, 2023Updated 3 years ago
- libRoadRunner: A high-performance SBML simulator☆64Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This course teaches undergraduate Economics students the basics to exploit the advantages of learning to code in R. The course covers pra…☆27Updated this week
- A Python wrapper for the UniProt Mapping RESTful API.☆16Mar 2, 2026Updated 8 months ago
- Code for the manuscript: Compressed phenotypic screening empowers scalable biological discovery.☆10Apr 17, 2024Updated 2 years ago
- kaggle-DATA-SCIENCE-BOWL-2018（U-net）☆15May 2, 2018Updated 8 years ago
- ☆12Feb 21, 2020Updated 6 years ago
- Notes and procedures that I wrote as Radiation Physicist Assistant at Cookeville Regional Medical Center☆11Jun 8, 2022Updated 4 years ago
- Multiscale simulation of multi-cellular system☆11Updated this week
- A python tool to assist in checking radiotherapy treatment plans.☆12Jul 11, 2016Updated 10 years ago
- TomoTherapy exit detector analysis tool☆13Oct 12, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- HBAT 2: A Python Package to analyse Hydrogen Bonds and Other Non-covalent Interactions in Macromolecular Structures https://hbat-web.abh…☆11Oct 23, 2026Updated 2 weeks ago
- This is the fully public version of QSP Toolbox. Please check the README file for the current version of MATLAB that is supported.☆27Dec 29, 2025Updated 10 months ago
- Official platform-independent PyTRiP graphical user interface☆11Jun 18, 2026Updated 4 months ago
- Interactive Performance, Analysis and Visualization of RAVE Latent Spaces via PCA and OSC Integration☆22Jul 15, 2025Updated last year
- RITE Dos (Radiotherapy In vivo Two-Dimensional EPID Dosimetry) is MATLAB software package that does just that, provides in vivo dosimetry…☆13Feb 15, 2018Updated 8 years ago
- visual publications + visual media tools developed by Lev Manovich☆44Updated this week
- This page hosts NeKo, a python package that allow the user to automatically build gene regulatory networks from any databases.☆22Oct 28, 2026Updated last week
Are these results useful?