Alternatives and similar repositories for Machine-learning

Users that are interested in Machine-learning are comparing it to the libraries listed below

• DC-Jade / bioinfo_pi_atlas
  ☆52Updated 2 years ago
• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆27Updated 2 years ago
• XinmingTu / Awesome-Bio-ML-PKU
  This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking Unive…
  ☆15Updated 5 years ago
• deepomicslab / GCNFrame
  This is a python package for genomics study with a GCN framework.
  ☆41Updated 7 months ago
• ZJUFanLab / scDeepSort
  Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network
  ☆103Updated 2 years ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆81Updated 3 years ago
• ShenLab-Genomics / SpliceTransformer
  SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence
  ☆27Updated 7 months ago
• jsxlei / SCALE
  Single-cell ATAC-seq analysis via Latent feature Extraction
  ☆102Updated last year
• xiaoyeye / CNNC
  covolutional neural network based coexpression analysis
  ☆78Updated 5 years ago
• vahuynh / GENIE3
  Machine learning-based approach for the inference of gene regulatory networks from expression data.
  ☆83Updated 3 years ago
• mit6874 / mit6874.github.io
  ☆50Updated 4 years ago
• tanjimin / C.Origami
  C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
  ☆75Updated last year
• epigen / KPNN
  Knowledge-primed neural networks
  ☆38Updated 2 years ago
• HelloWorldLTY / UKBioLM
  ☆18Updated 2 months ago
• FunctionLab / sei-framework
  code to run sei and obtain sei and sequence class predictions
  ☆105Updated 2 years ago
• xCompass-AI / GeneCompass
  GeneCompass
  ☆84Updated 3 weeks ago
• TencentAILabHealthcare / scPROTEIN
  ☆52Updated 7 months ago
• MedChaabane / DeepBind-with-PyTorch
  CNN architecture for predicting DNA binding sites for Transcription Factors
  ☆52Updated 6 years ago
• XWangLabTHU / NeuronMotif
  NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks
  ☆15Updated 2 years ago
• gao-lab / Cell_BLAST
  A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.
  ☆92Updated 11 months ago
• CompBio-PhD-cn / handbook
  This is a project aims to help Chinese student apply compbio PhD program
  ☆24Updated 3 years ago
• Illumina / PromoterAI
  ☆62Updated 2 weeks ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 11 months ago
• theislab / scgen-reproducibility
  ☆29Updated 4 years ago
• GET-Foundation / get_model
  A modular framework for multimodal cross-cell-type transcriptional regulation models
  ☆79Updated last week
• JackieHanLab / TOSICA
  Transformer for One-Stop Interpretable Cell-type Annotation
  ☆142Updated last year
• HantaoShu / DeepSEM
  ☆82Updated 2 years ago
• hui2000ji / scETM
  A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.
  ☆50Updated 3 years ago
• liu-bioinfo-lab / EPCOT
  ☆23Updated last year
• brianpenghe / Bio-Jobs
  A list of positions (mostly biology-related) open to apply
  ☆35Updated 2 months ago