KlugerLab / pyFIt-SNELinks
Python Wrapper for FIt-SNE
☆45Updated 4 years ago
Alternatives and similar repositories for pyFIt-SNE
Users that are interested in pyFIt-SNE are comparing it to the libraries listed below
Sorting:
- Tools for munging genomic data☆21Updated 6 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Updated 5 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 3 years ago
- Find bimodal, unimodal, and multimodal features in your data☆27Updated 7 years ago
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Updated 5 years ago
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆119Updated 3 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆61Updated 4 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- ☆21Updated 8 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 5 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Updated 7 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated 2 years ago
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- Yet Another Motif Discovery Algorithm☆53Updated 7 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- Literature mining for T cell relations☆23Updated 3 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- ☆63Updated 5 years ago
- ☆33Updated 4 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Updated 8 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…☆27Updated 4 years ago
- Systematically learn and evaluate manifolds from high-dimensional data☆104Updated 3 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…☆69Updated 3 years ago