Python Wrapper for FIt-SNE
☆45May 11, 2021Updated 4 years ago
Alternatives and similar repositories for pyFIt-SNE
Users that are interested in pyFIt-SNE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Spatial Single Cell transcriptomic library☆19Jan 15, 2026Updated 2 months ago
- The art of using t-SNE for single-cell transcriptomics☆131Nov 29, 2024Updated last year
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Jan 12, 2024Updated 2 years ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 2 weeks ago
- Imputation method for scRNA-seq based on low-rank approximation☆79Dec 14, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Heterogeneity Induced Pre-Processing tOol☆18Aug 15, 2021Updated 4 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated last month
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Dec 7, 2021Updated 4 years ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 8 years ago
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆24Nov 3, 2021Updated 4 years ago
- ☆11May 30, 2023Updated 2 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 5 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40May 6, 2022Updated 3 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A toolking for cell type hierarchies: marker selection & consistent classification☆22Nov 26, 2023Updated 2 years ago
- Robust Sparse PCA using the ROSPCA algorithm of Hubert et al. (2016)☆13Nov 30, 2024Updated last year
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- A unified array job submitter for LSF, SGE/UGE and Slurm☆32Oct 15, 2024Updated last year
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 7 years ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆33Jan 3, 2023Updated 3 years ago
- Log command line events to a graph database :)☆13Mar 12, 2016Updated 10 years ago
- Material for introductory course on using Blender for 3D printing☆11Jun 22, 2016Updated 9 years ago
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Aug 24, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆23Sep 7, 2019Updated 6 years ago
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Apr 10, 2016Updated 10 years ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆22Jun 7, 2021Updated 4 years ago
- ☆17Apr 27, 2023Updated 2 years ago
- ☆11Oct 31, 2022Updated 3 years ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- ☆21Dec 26, 2025Updated 3 months ago
- Probabilistic Classifier Chains (PCC) algorithm solving the problem of Multi-Label Classification. For more information see: Krzysztof De…☆15Jun 25, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Aug 30, 2024Updated last year
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Feb 7, 2019Updated 7 years ago
- Parametric sweep of simulated microbial communities and metagenomic sequencing.☆11Jul 15, 2022Updated 3 years ago
- Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis☆105Apr 1, 2026Updated last week
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Dec 11, 2025Updated 4 months ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- ☆16May 25, 2021Updated 4 years ago