Python Optimal Leaf Ordering for Hierarchical Clustering
☆22Jun 21, 2017Updated 9 years ago
Alternatives and similar repositories for polo
Users that are interested in polo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Feb 13, 2018Updated 8 years ago
- Find nodes in hierarchical clustering that are statistically significant☆32Oct 15, 2017Updated 9 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 3 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- ☆13Feb 19, 2017Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Rust in bioinformatics and computational biology☆17Oct 22, 2022Updated 3 years ago
- Source code for SimBac, a bacterial genome simulator☆14Sep 20, 2024Updated 2 years ago
- ☆17Jan 2, 2024Updated 2 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆22May 25, 2021Updated 5 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 12 years ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated 2 years ago
- A terminal UI for monitoring Snakemake workflows☆25Jul 20, 2026Updated 2 months ago
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- Pareto Task Inference in Python☆23Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆15Mar 31, 2022Updated 4 years ago
- Python bindings to minimap2☆16Sep 18, 2017Updated 9 years ago
- AlphaFold ported to the M1 GPU☆10Mar 6, 2023Updated 3 years ago
- Color DNA/RNA bases in terminal output☆22Aug 29, 2017Updated 9 years ago
- Biological Graphic tool in Python☆34May 14, 2020Updated 6 years ago
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆28May 23, 2024Updated 2 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 11 years ago
- Pipeline for designing custom probes against human genes☆24Jan 30, 2026Updated 8 months ago
- A scales package for python☆69Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- python implementation of the PAGE algorithm☆24Feb 15, 2026Updated 7 months ago
- Legend made easy for matplotlib☆36Aug 27, 2026Updated last month
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- Software for comparing contact maps from HiC, CaptureC and other 3D genome data.☆26May 21, 2018Updated 8 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 10 years ago
- Advanced R 1-day course taught at the University of Cambridge☆11Jul 6, 2018Updated 8 years ago
- Implementation of various scaling/depixelating techbologies☆13Jun 24, 2017Updated 9 years ago
- Nested lists published on GitHub.☆13Sep 7, 2022Updated 4 years ago
- python / numpy / pandas / patsy version of ComBat for removing batch effects.☆106Dec 31, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆23Apr 3, 2023Updated 3 years ago
- ☆32Jul 11, 2018Updated 8 years ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆30Mar 2, 2020Updated 6 years ago
- Robust and scalable single-cell signature scoring☆29Updated this week
- Engaging visualisations, made easy.☆14Aug 7, 2024Updated 2 years ago
- Hill Shading implementation for Matplotlib☆11May 23, 2015Updated 11 years ago
- Depixelating Pixel Art☆16Dec 31, 2015Updated 10 years ago