maclandrol / FisherExactLinks
Fisher exact test for mxn contingency table in python
☆38Updated last year
Alternatives and similar repositories for FisherExact
Users that are interested in FisherExact are comparing it to the libraries listed below
Sorting:
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- Python Wrapper for FIt-SNE☆45Updated 4 years ago
- Fast hierarchical clustering routines for R and Python.☆156Updated this week
- Bioinformatics in Python☆58Updated last year
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆119Updated 3 years ago
- A python library for generating a clustered heatmap with dendrograms.☆34Updated 3 years ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- plot chord diagram with matplotlib☆84Updated 4 years ago
- Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise☆37Updated 2 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 9 months ago
- A flexible version of CorEx developed for bio-data challenges that handles missing data, continuous/discrete variables, multi-CPU, overla…☆143Updated 4 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆61Updated 4 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- Python library to simulate evolutionary sequence data☆80Updated 4 years ago
- markov clustering in python☆175Updated 4 years ago
- Pandas DataFrames for phylogenetics☆74Updated 4 years ago
- A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.☆322Updated 7 years ago
- Yet Another Motif Discovery Algorithm☆53Updated 7 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- Draw UpSet plots with Matplotlib☆375Updated last year
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16Updated 11 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Updated 7 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…☆120Updated 3 years ago
- Poisson Binomial Probability Distribution for Python☆84Updated 6 years ago
- fast, pure-python interval overlap testing☆52Updated 5 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆125Updated 2 years ago
- Python package that implements the PCHA algorithm for Archetypal Analysis by Mørup et. al.☆41Updated 4 months ago
- python / numpy / pandas / patsy version of ComBat for removing batch effects.☆105Updated 7 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago