Python package that implements the PCHA algorithm for Archetypal Analysis by Mørup et. al.
☆47Aug 28, 2025Updated last year
Alternatives and similar repositories for py_pcha
Users that are interested in py_pcha are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Matlab package to perform Pareto Task Inference (ParTI), which infers tasks from high-dimensional datasets.☆15Jan 21, 2020Updated 6 years ago
- Library for generating various random variables☆15Oct 2, 2026Updated last week
- R toolbox for Archetypal Analysis and Pareto Task Inference on single cell data (based on ParTI)☆32Jul 27, 2020Updated 6 years ago
- Archetypal Analysis network (AAnet)☆41Jan 30, 2025Updated last year
- Single-cell archetypal analysis neural network☆15May 27, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- (1) Input a network. (2) Style it. (3) Download the result.☆28Feb 13, 2020Updated 6 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 5 years ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- pCMF R package☆14Apr 16, 2019Updated 7 years ago
- Scikit-learn compatible package for archetypal analysis.☆31Jun 16, 2026Updated 3 months ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆18Feb 8, 2019Updated 7 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 10 months ago
- Python code for "Fast Bayesian nonnegative matrix factorisation and tri-factorisation", presented at NIPS 2016 Workshop on Advances in Ap…☆21Jun 10, 2018Updated 8 years ago
- Consistent Clusters for scRNA-seq☆12Oct 6, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 9 years ago
- Fast prototyping of infectious-disease models based on reaction equations. Analyze the ODEs analytically or numerically, or run stochasti…☆35Oct 6, 2025Updated last year
- ☆12Jul 6, 2023Updated 3 years ago
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆65Feb 1, 2021Updated 5 years ago
- Geometry-preserving random sampling☆98Oct 29, 2024Updated last year
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆25Feb 24, 2025Updated last year
- Inference for diffusion processes with the use of `Guided Proposals`☆16Oct 20, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- DEPRECATED Tools for manipulating cell expression format (CEF) files☆12Oct 10, 2017Updated 9 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- Fast algorithms for GLM-PCA.☆18Mar 12, 2025Updated last year
- Python package to perform normalization and variance-stabilization of single-cell data☆29Jul 17, 2025Updated last year
- download and prepare a pdb file for docking wth Vina-flavoured algorithms☆13Oct 11, 2021Updated 4 years ago
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆15Jun 5, 2019Updated 7 years ago
- MERlin is an extensible analysis pipeline applied to decoding MERFISH data☆37Sep 21, 2021Updated 5 years ago
- ☆27Apr 15, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- learning state-space targets in dynamical systems☆28Jun 1, 2024Updated 2 years ago
- ☆13Jun 4, 2023Updated 3 years ago
- Quick pre-QC knee plots for barcode based scRNAseq data☆13Dec 8, 2018Updated 7 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆18Jun 4, 2019Updated 7 years ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- TCR Reconstruction Algorithm for Paired-End Single cell☆14Oct 13, 2019Updated 6 years ago