WarrenWeckesser / heatmapcluster
A python library for generating a clustered heatmap with dendrograms.
☆31Updated 2 years ago
Alternatives and similar repositories for heatmapcluster:
Users that are interested in heatmapcluster are comparing it to the libraries listed below
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Updated 8 years ago
- A Python package for gene network analysis☆32Updated 2 years ago
- ☆36Updated 7 years ago
- bioinformatics visualization tools with pyviz/bokeh☆19Updated last year
- A library to simulate single-cell data☆2Updated last year
- Tools for munging genomic data☆21Updated 5 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Converts p-values in q-values, see (Storey and Tibshirani, 2003)☆29Updated 7 years ago
- SRA python tools☆10Updated 3 years ago
- Bam to Pandas DataFrame, quickly☆13Updated 4 months ago
- generalized principal component analysis (GLM-PCA) implemented in python☆58Updated 3 years ago
- Tutorials for the InterMine Python web client☆14Updated 2 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 6 years ago
- ☆24Updated 3 years ago
- ☆11Updated 7 years ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆25Updated 7 months ago
- Plot categorical heatmaps with seaborn☆18Updated 2 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆9Updated 7 years ago
- GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge☆14Updated 7 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 7 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- Python interface to amino acid properties and IEDB☆55Updated 3 months ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 6 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 8 years ago
- Library for visualising genomic features in Python.☆15Updated 7 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆44Updated 4 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆40Updated 3 years ago
- Computational biology utility scripts☆19Updated 6 months ago
- Align sequences and then parse features.☆17Updated 4 months ago