WarrenWeckesser / heatmapclusterLinks
A python library for generating a clustered heatmap with dendrograms.
☆34Updated 3 years ago
Alternatives and similar repositories for heatmapcluster
Users that are interested in heatmapcluster are comparing it to the libraries listed below
Sorting:
- Pandas DataFrames for phylogenetics☆75Updated 4 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆38Updated 2 years ago
- bioinformatics visualization tools with pyviz/bokeh☆20Updated 2 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 10 months ago
- ☆36Updated 8 years ago
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- Concise: Keras extension for regulatory genomics☆35Updated 3 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data☆18Updated 3 years ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 6 months ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- PyCogent: Official repository for software and unit tests☆92Updated 4 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- python / numpy / pandas / patsy version of ComBat for removing batch effects.☆105Updated 7 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆32Updated 8 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16Updated 11 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10Updated 8 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆86Updated 8 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆20Updated 9 years ago
- Python library to simulate evolutionary sequence data☆80Updated 4 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated 2 years ago
- Converts p-values in q-values, see (Storey and Tibshirani, 2003)☆29Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- FFPopSim is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the prod…☆14Updated 3 months ago