Alternatives and similar repositories for clustergrammer-widget

Users that are interested in clustergrammer-widget are comparing it to the libraries listed below

• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 4 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated 2 years ago
• biokit / biokit
  Bioinformatics in Python
  ☆58Updated last year
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆41Updated 6 years ago
• adrianveres / polo
  Python Optimal Leaf Ordering for Hierarchical Clustering
  ☆21Updated 8 years ago
• ericmjl / hiveplot
  Hive Plots in using Python & matplotlib!
  ☆71Updated 7 years ago
• YeoLab / flotilla
  Reproducible machine learning analysis of gene expression and alternative splicing data
  ☆126Updated 2 years ago
• ismms-himc / clustergrammer2
  "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.
  ☆118Updated 2 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated last month
• ericmjl / flu-sequence-predictor
  An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.
  ☆36Updated 2 years ago
• outlierbio / ob-project-template
  Outlier Bio analysis project template
  ☆56Updated 7 years ago
• themantalope / pydendroheatmap
  A tool for generating heatmaps from hierarchically clustered data.
  ☆40Updated 7 years ago
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 6 years ago
• ismms-himc / clustergrammer2-notebooks
  Examples using Clustergrammer2 to explore high-dimensional datasets.
  ☆40Updated 5 years ago
• ucsd-ccbb / visJS2jupyter
  visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells
  ☆78Updated 2 years ago
• mgymrek / pybeeswarm
  Beeswarm plots for python
  ☆34Updated 9 years ago
• Novartis / peax
  Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…
  ☆68Updated 2 years ago
• jmschrei / rambutan
  Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
  ☆21Updated 7 years ago
• mgalardini / python_plotting_snippets
  Tips and tricks for plotting in python
  ☆28Updated 6 years ago
• ericmjl / Circos
  ☆15Updated 2 years ago
• krassowski / nbpipeline
  Snakemake-like pipeline manager for reproducible Jupyter Notebooks
  ☆17Updated 3 years ago
• pamelarussell / github-bioinformatics
  Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
  ☆32Updated 6 years ago
• MaayanLab / clustergrammer
  An interactive heatmap visualization built using D3.js
  ☆235Updated 2 years ago
• gregversteeg / bio_corex
  A flexible version of CorEx developed for bio-data challenges that handles missing data, continuous/discrete variables, multi-CPU, overla…
  ☆143Updated 3 years ago
• isb-cgc / examples-Python
  Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.
  ☆54Updated 6 years ago
• minrk / condamagic
  %conda magic for IPython
  ☆28Updated 8 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆47Updated last week
• dreamtools / dreamtools
  Code sharing related to DREAM challenges
  ☆23Updated 8 years ago
• VCG / upset
  UpSet - Visualizing Intersecting Sets
  ☆239Updated 3 years ago
• BenjaminDoran / unidip
  Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise
  ☆37Updated last year