ramzan1990 / sequence2vec
☆21Updated 8 years ago
Alternatives and similar repositories for sequence2vec:
Users that are interested in sequence2vec are comparing it to the libraries listed below
- Tools for munging genomic data☆21Updated 5 years ago
- Sequence data label generation and ingestion into deep learning models☆12Updated 3 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆28Updated 7 years ago
- Network inference by fusing data from diverse distributions☆14Updated 8 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Literature mining for T cell relations☆23Updated 2 years ago
- ☆11Updated 7 years ago
- Tools for building and manipulating graphs in Python☆41Updated 2 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Updated 8 years ago
- ☆11Updated 7 years ago
- Implementation of the AIControl paper in Julia 1.0☆17Updated 6 years ago
- Python Wrapper for FIt-SNE☆45Updated 3 years ago
- Implementation of Fibered Auto-Encoders☆9Updated 4 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Updated 5 years ago
- Code accompanying the publication for compressed graph annotation☆13Updated 6 years ago
- GECO (Gene Expression Clustering Optimization; theGECOapp.com) is a minimalistic GUI app that utilizes non-linear reduction techniques to…☆9Updated last year
- Proteins as words, genomes as documents.☆20Updated 4 years ago
- A project to capture biological pathway data from academic papers☆29Updated this week
- A library to simulate single-cell data☆2Updated last year
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆10Updated this week
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Updated 7 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 5 years ago
- DEPRECATED: Store and query public TCGA data☆11Updated 8 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆14Updated 6 years ago
- Vector space representation of genetic data☆36Updated 8 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Updated 7 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Updated 6 years ago
- Bayesian Factorization with Side Information in C++ with Python wrapper☆41Updated 3 years ago