lskatz / adapterseqsLinks
A repo with just adapter sequences
☆15Updated 2 months ago
Alternatives and similar repositories for adapterseqs
Users that are interested in adapterseqs are comparing it to the libraries listed below
Sorting:
- PanTax: Strain-level metagenomic profiling using pangenome graphs☆43Updated last month
- Read contamination removal☆25Updated last year
- software to identify primers that can distinguish genomes☆20Updated 8 months ago
- Genome size estimation from long read overlaps☆61Updated this week
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆12Updated last year
- Remove human reads from a sequencing run☆40Updated last month
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19Updated last year
- Bacterial Operon Finder for Functional Organization☆15Updated last year
- Visualize microbial evolution at the SNP level!☆15Updated last month
- TAXnomic Profile Aggregation and STAndardisation☆41Updated last month
- Organism-specific interpretation of AMR genotypes☆14Updated last year
- ☆14Updated 4 years ago
- Generate basic stats for an assembly.☆13Updated 2 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆52Updated 5 months ago
- A mathematically characterized hypothesis test for organism presence/absence in a metagenome☆31Updated 3 weeks ago
- tool to determine optimal refrerence genome given a set of fasta files☆15Updated 2 years ago
- GRIMER performs analysis of microbiome studies and generates a portable and interactive dashboard integrating annotation, taxonomy and me…☆22Updated 2 years ago
- Genomic neighbor typing of bacterial pathogens using MinHash☆43Updated 2 years ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆38Updated 6 months ago
- A Nextflow pipeline for genome and pan-genome annotation☆15Updated 3 months ago
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆18Updated 6 months ago
- Detect contigs of complete circular genomes☆23Updated 6 years ago
- In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data☆20Updated last year
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆25Updated 6 years ago
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆13Updated last month
- sunburst plots for taxonomy - working to update Krona☆39Updated this week
- Get microbial sequence data easier and faster☆28Updated 5 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Updated 2 years ago
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.☆20Updated 9 months ago
- MetagenOmic read Re-Assigner and abundance quantifier☆18Updated 7 months ago