JiaShun-Xiao / BLAST-bioinfor-toolLinks
Python implementation of Basic Local Alignment Search Tool (BLAST) , which is the core algorithm in sequence alignment for genomes.
☆76Updated 2 years ago
Alternatives and similar repositories for BLAST-bioinfor-tool
Users that are interested in BLAST-bioinfor-tool are comparing it to the libraries listed below
Sorting:
- Tools for manipulating biological data, particularly multiple sequence alignments☆158Updated 3 weeks ago
- WebLogo 3: Sequence Logos redrawn☆152Updated 5 months ago
- nucleic acid folding☆105Updated 2 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆115Updated 11 months ago
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆242Updated 3 weeks ago
- ☆58Updated 4 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆115Updated 4 years ago
- Parsing tools for GTF (gene transfer format) files☆121Updated 8 months ago
- Python interface to running command-line and web-based MHC binding predictors☆98Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆45Updated 9 years ago
- Alignment of RNAs☆24Updated last year
- Peptide-MHC I binding affinity prediction☆218Updated 5 months ago
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆54Updated last year
- ☆68Updated 2 years ago
- An RNA manipulation library.☆56Updated last year
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆167Updated 3 weeks ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- ☆70Updated this week
- Simple oligo analysis and primer design☆182Updated last month
- Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing☆173Updated last year
- Tool for deep mutational scanning experiments.☆54Updated 7 months ago
- Software for the visualization of sequence-function relationships☆206Updated 4 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆42Updated last week
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- sensitive and precise assembly of short sequencing reads☆161Updated last year
- Webserver and command line tool for annotating engineered plasmids☆133Updated 3 months ago
- Create force-directed graphs of RNA secondary structures.☆108Updated 5 years ago
- CRISPR Cas9 ontarget prediction software☆27Updated 7 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- ☆162Updated this week