JiaShun-Xiao / BLAST-bioinfor-toolLinks
Python implementation of Basic Local Alignment Search Tool (BLAST) , which is the core algorithm in sequence alignment for genomes.
☆77Updated 2 years ago
Alternatives and similar repositories for BLAST-bioinfor-tool
Users that are interested in BLAST-bioinfor-tool are comparing it to the libraries listed below
Sorting:
- Alignment of RNAs☆25Updated last year
- nucleic acid folding☆108Updated 4 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆119Updated last year
- Tools for manipulating biological data, particularly multiple sequence alignments☆159Updated 3 weeks ago
- sensitive and precise assembly of short sequencing reads☆162Updated last year
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- WebLogo 3: Sequence Logos redrawn☆152Updated 7 months ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing☆173Updated last year
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆54Updated last year
- ☆70Updated 2 years ago
- Webserver and command line tool for annotating engineered plasmids☆134Updated 5 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated this week
- BGC Detection and Classification Using Deep Learning☆157Updated 2 years ago
- Tool for deep mutational scanning experiments.☆55Updated 9 months ago
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆243Updated 2 months ago
- General low-level API☆50Updated 3 years ago
- ☆71Updated last month
- Logan Unitigs and Contigs☆179Updated 3 months ago
- An RNA manipulation library.☆56Updated last year
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- Sequana: a set of Snakemake NGS pipelines☆151Updated last month
- Galaxy Tool wrappers☆122Updated this week
- A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipu…☆85Updated last year
- Create force-directed graphs of RNA secondary structures.☆110Updated 5 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆115Updated 4 years ago
- CRISPR Cas9 ontarget prediction software☆28Updated 9 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆46Updated 9 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago