obigriffith / biostar-tutorialsLinks
Code for biostar tutorials - mostly R and Perl
☆50Updated last year
Alternatives and similar repositories for biostar-tutorials
Users that are interested in biostar-tutorials are comparing it to the libraries listed below
Sorting:
- ☆61Updated 5 years ago
- microRNA profiling pipeline☆79Updated 3 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆93Updated 8 years ago
- RNA-seq data analysis practical☆61Updated 11 years ago
- ☆72Updated 3 years ago
- ☆55Updated this week
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆114Updated 2 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆96Updated 11 months ago
- DNA methylation analysis notes from Ming Tang☆87Updated 5 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆66Updated 2 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study☆103Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- A pipeline and a framework for NGS analysis (RNA-seq and scRNA-seq)☆54Updated 2 months ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- Integrated Differential Expression and Pathway analysis☆132Updated last week
- An R package for inferring the subclonal architecture of tumors☆122Updated last year
- Course material in notebook format for learning about single cell bioinformatics methods☆99Updated 9 years ago
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 4 years ago
- DE analysis module for Week3☆67Updated 9 years ago
- An R client for broads firehose pipeline, providing TCGA data sets☆61Updated 6 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Updated 9 years ago
- R data package for annotating/converting Gene IDs☆167Updated 2 months ago
- Tools for processing UMI RNA-tag data☆131Updated 2 years ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- A factor analysis package☆101Updated 13 years ago