Code for biostar tutorials - mostly R and Perl
☆50Jul 31, 2024Updated last year
Alternatives and similar repositories for biostar-tutorials
Users that are interested in biostar-tutorials are comparing it to the libraries listed below
Sorting:
- CLIP Tool Kit (CTK)☆21Apr 28, 2024Updated last year
- 软件方面的包 (包括各种芯片数据处理,NGS数据处理,差异分析等等!)☆14Apr 23, 2016Updated 9 years ago
- ☆10Jul 15, 2016Updated 9 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- 361 Division - Scientific Training, Education and Learning☆28Oct 1, 2020Updated 5 years ago
- ☆10Apr 10, 2016Updated 9 years ago
- ChIP-seq analysis notes from Tommy Tang☆19Jun 28, 2016Updated 9 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Aug 16, 2018Updated 7 years ago
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Jul 10, 2019Updated 6 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆14Jul 3, 2012Updated 13 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 10 years ago
- ☆17Dec 15, 2017Updated 8 years ago
- Git使用手册☆17Mar 10, 2019Updated 6 years ago
- some short but practical PERL script in NGS data analysis☆16Oct 30, 2017Updated 8 years ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- a small collection for my R scripts☆166Mar 1, 2019Updated 7 years ago
- It's just a personal record for studying how to analysis TCGA data(expression+mutation+methylation+CNV)☆20Dec 28, 2016Updated 9 years ago
- From IDAT to beta.☆25Jul 13, 2018Updated 7 years ago
- Repository to reproduce analyses from the GTEx V6P Rare Variation Manuscript☆17Nov 13, 2017Updated 8 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆68Sep 10, 2023Updated 2 years ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆42Nov 20, 2019Updated 6 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆28Jan 9, 2021Updated 5 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- ☆12Mar 5, 2024Updated last year
- "Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus R…☆13Jan 7, 2018Updated 8 years ago
- microbial bioinformation☆13May 14, 2020Updated 5 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 12 years ago
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Jul 22, 2020Updated 5 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Mar 7, 2020Updated 5 years ago
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Aug 25, 2020Updated 5 years ago
- ☆136Aug 30, 2019Updated 6 years ago
- Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal…☆13Feb 11, 2023Updated 3 years ago
- ☆10Aug 22, 2018Updated 7 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Jul 6, 2020Updated 5 years ago
- Breast Cancer Single Cell Atlas☆12Mar 31, 2022Updated 3 years ago
- ☆12Jan 29, 2020Updated 6 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Aug 8, 2023Updated 2 years ago