obigriffith / biostar-tutorialsLinks
Code for biostar tutorials - mostly R and Perl
☆50Updated last year
Alternatives and similar repositories for biostar-tutorials
Users that are interested in biostar-tutorials are comparing it to the libraries listed below
Sorting:
- ☆62Updated 5 years ago
- RNA-seq data analysis practical☆62Updated 11 years ago
- microRNA profiling pipeline☆81Updated 4 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Updated 8 years ago
- DNA methylation analysis notes from Ming Tang☆92Updated 6 years ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆171Updated last week
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- An R package for inferring the subclonal architecture of tumors☆121Updated 2 years ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆62Updated 6 years ago
- ☆57Updated 2 weeks ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- A pipeline and a framework for NGS analysis (RNA-seq and scRNA-seq)☆54Updated this week
- deconstructSigs☆144Updated 2 years ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 7 years ago
- Batch effects and the effective design of single-cell gene expression studies☆104Updated 6 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆99Updated last year
- An R client for broads firehose pipeline, providing TCGA data sets☆61Updated 6 years ago
- Create KEGG.db Package☆64Updated last week
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 4 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆68Updated 2 years ago
- An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study☆103Updated 3 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Updated 9 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Updated 7 years ago
- Transcript quantification import for modular pipelines☆142Updated 4 months ago
- ☆61Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆119Updated 6 months ago
- Inferring and visualizing clonal evolution in multi-sample cancer sequencing☆149Updated 5 years ago
- ☆33Updated 7 years ago
- A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor☆43Updated 9 years ago