GabrielHoffman / dream_analysisLinks
Simulation and data analysis code for dream paper
☆11Updated 5 years ago
Alternatives and similar repositories for dream_analysis
Users that are interested in dream_analysis are comparing it to the libraries listed below
Sorting:
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated 2 years ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Updated this week
- Package to wrangle and visualize genomic data in R☆26Updated 3 months ago
- A unified framework for working transparently with on-disk and in-memory array-like datasets☆27Updated 3 months ago
- Implementation of the matrixStats API for sparse matrices☆54Updated 9 months ago
- Stata package for two-sample Mendelian randomization analyses using summary data☆24Updated 3 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15Updated 9 months ago
- Monte Carlo Reference-based Consensus Clustering☆37Updated 5 years ago
- An r interface to perform ROMA☆10Updated 7 years ago
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆85Updated last month
- ☆96Updated last year
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated 3 months ago
- ☆75Updated last year
- R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experi…☆15Updated 4 years ago
- Exploring dimension-reduced embeddings☆111Updated 3 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Performance oriented statistical metrics and utility functions in R☆30Updated 5 years ago
- R package for Empirical Bayes Factor Analysis.☆52Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Out-of-Core Principal Component Analysis☆19Updated 8 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Updated 9 years ago
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 5 years ago
- Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.☆14Updated 5 years ago
- Bioconductor facilities for parallel evaluation☆69Updated 3 months ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Updated last year
- R pkg for Hierarchical Dirichlet Process☆81Updated 2 years ago
- Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications☆34Updated 4 years ago
- Automate package and project setup for Bioconductor packages☆54Updated 10 months ago