A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform
☆56Jan 8, 2023Updated 3 years ago
Alternatives and similar repositories for BioInstaller
Users that are interested in BioInstaller are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.☆20Nov 20, 2018Updated 7 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Aug 16, 2018Updated 7 years ago
- Implements the JSON, INI, YAML and TOML parser, for R setting and writing of configuration file.☆62Jul 19, 2023Updated 2 years ago
- anor: an annotation and visualization system based on R and Shiny framework☆34Apr 20, 2020Updated 6 years ago
- Source code of openbiox homepage (under development status).☆14May 9, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A set of command line tools based on R and JavaScript.☆17Apr 21, 2020Updated 6 years ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 7 years ago
- Let's get started!☆15Oct 21, 2019Updated 6 years ago
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 3 years ago
- ☆15Apr 26, 2022Updated 4 years ago
- NGS perl modules☆10Updated this week
- ☆10Apr 20, 2018Updated 8 years ago
- ☆13Mar 11, 2019Updated 7 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆32Jul 13, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R package to create forestplots of measures of effects with their confidence intervals.☆65May 7, 2021Updated 5 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆73May 23, 2024Updated last year
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/☆13Jul 28, 2025Updated 9 months ago
- A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sample☆33Mar 10, 2023Updated 3 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆21May 3, 2019Updated 7 years ago
- tools for the analysis of color data in R☆81Mar 29, 2026Updated last month
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆49Feb 26, 2021Updated 5 years ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Dec 11, 2025Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Set up your GitHub Actions workflow with a specific version of R☆12Sep 7, 2020Updated 5 years ago
- ☆41Oct 12, 2017Updated 8 years ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- ☆17Dec 15, 2017Updated 8 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆22Dec 14, 2021Updated 4 years ago
- Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference☆14Nov 13, 2025Updated 6 months ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆50Jun 30, 2023Updated 2 years ago
- Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.☆43Feb 20, 2026Updated 2 months ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆42Nov 20, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆69Sep 10, 2023Updated 2 years ago
- Helper script for bioconductor/bioconductor_docker☆13Updated this week
- Phylogenetic tools for Eco-phylogenetics☆15Oct 10, 2024Updated last year
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- My own tools code for NGS data analysis (Next Generation Sequencing)☆31Aug 11, 2019Updated 6 years ago
- GWAS analysis process based on EMMAX software☆18Dec 12, 2023Updated 2 years ago
- Bizard: A Biomedical Visualization Atlas. https://openbiox.github.io/Bizard/☆61Updated this week