A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform
☆56Jan 8, 2023Updated 3 years ago
Alternatives and similar repositories for BioInstaller
Users that are interested in BioInstaller are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.☆20Nov 20, 2018Updated 7 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Aug 16, 2018Updated 7 years ago
- Implements the JSON, INI, YAML and TOML parser, for R setting and writing of configuration file.☆62Jul 19, 2023Updated 3 years ago
- Source code of openbiox homepage (under development status).☆14May 9, 2023Updated 3 years ago
- anor: an annotation and visualization system based on R and Shiny framework☆32Apr 20, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A set of command line tools based on R and JavaScript.☆17Apr 21, 2020Updated 6 years ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 7 years ago
- Let's get started!☆15Oct 21, 2019Updated 6 years ago
- A curated list of resources for learning bioinformatics.☆519Jul 9, 2026Updated last month
- ☆15Apr 26, 2022Updated 4 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- NGS perl modules☆10Jul 31, 2026Updated last week
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated last year
- A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sample☆34Mar 10, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An R package to create forestplots of measures of effects with their confidence intervals.☆66May 7, 2021Updated 5 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆33Jul 13, 2023Updated 3 years ago
- ☆13Mar 11, 2019Updated 7 years ago
- ☆10Jan 21, 2023Updated 3 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72May 23, 2024Updated 2 years ago
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/☆13Jun 2, 2026Updated 2 months ago
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆51Feb 26, 2021Updated 5 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆21May 3, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- tools for the analysis of color data in R☆81Jul 30, 2026Updated last week
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆51Jun 30, 2023Updated 3 years ago
- Set up your GitHub Actions workflow with a specific version of R☆12Sep 7, 2020Updated 5 years ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Dec 11, 2025Updated 7 months ago
- ☆42Oct 12, 2017Updated 8 years ago
- Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference☆14Jun 9, 2026Updated 2 months ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆22Dec 14, 2021Updated 4 years ago
- ☆17Dec 15, 2017Updated 8 years ago
- Execute command line tool from R☆23Mar 17, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- My own tools code for NGS data analysis (Next Generation Sequencing)☆32Aug 11, 2019Updated 6 years ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆44Nov 20, 2019Updated 6 years ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.☆43Feb 20, 2026Updated 5 months ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 4 years ago
- Helper script for bioconductor/bioconductor_docker☆13May 19, 2026Updated 2 months ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Oct 19, 2019Updated 6 years ago