neurodata / ndstoreLinks
code for storing neurodata images and image annotations
☆37Updated 8 years ago
Alternatives and similar repositories for ndstore
Users that are interested in ndstore are comparing it to the libraries listed below
Sorting:
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Updated 9 months ago
- scripts for using spark on janelia's cluster☆13Updated 2 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆26Updated 3 weeks ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- Interactive notebooks for trying analyses and exploring datasets☆32Updated 10 years ago
- Software package for neuron reconstruction and visualization☆40Updated 6 months ago
- Collaborative Annotation Toolkit for Massive Amounts of Image Data☆198Updated 3 weeks ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- Python SDK for interacting with the BossDB REST API☆22Updated 7 months ago
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆12Updated 4 years ago
- Render transformed image tiles☆34Updated last week
- benchmarking challenge for finding neurons in imaging data☆74Updated 6 years ago
- Visualize, share and annotate your large 3D images online☆160Updated this week
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- Not HDF5☆191Updated last week
- python interface to neurodata code☆18Updated 6 years ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆19Updated 3 weeks ago
- A minimal package for saving and reading large HDF5-based chunked arrays.☆15Updated 3 years ago
- A Python package for feature extraction of neural morphologies☆43Updated last month
- Python library to interface with CATMAID servers. Fully interoperable with navis.☆24Updated 8 months ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Updated 7 years ago
- ImJoy: Deep Learning Made Easy!☆191Updated 2 years ago
- Java library for scientific image computing☆16Updated 4 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 4 months ago
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Updated 3 years ago
- Get Your Brain Together Neuroimage Registration Workshops and Hackathons☆21Updated last year
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Updated last week
- WebGL-based viewer for volumetric data☆24Updated this week
- Adaptive Platform for Neuroscience Experiments☆42Updated 3 weeks ago