Alternatives and similar repositories for openMINDS

Users that are interested in openMINDS are comparing it to the libraries listed below

• openMetadataInitiative / openMINDS_core
  The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research prod…
  ☆24Updated 3 weeks ago
• FZJ-INM1-BDA / siibra-python
  Software interfaces for interacting with brain atlases - Python client
  ☆56Updated this week
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆47Updated last year
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆19Updated last year
• brainglobe / brainglobe-atlasapi
  A Python interface to access neuroanatomical atlases
  ☆170Updated last week
• NeurodataWithoutBorders / pynwb
  A Python API for working with Neurodata stored in the NWB Format
  ☆207Updated last week
• NeurodataWithoutBorders / nwb_tutorial
  Tutorials for learning NWB
  ☆17Updated 3 years ago
• BlueBrain / NeuroM
  Neuronal Morphology Analysis Tool
  ☆108Updated 11 months ago
• AllenInstitute / sonata
  Collaboration between BBP and AIBS
  ☆59Updated 2 months ago
• openMetadataInitiative / openMINDS_SANDS
  A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
  ☆14Updated last week
• NeurodataWithoutBorders / nwbinspector
  Tool to help inspect NWB files for compliance with NWB Best Practices
  ☆21Updated last week
• AllenInstitute / bmtk
  Brain Modeling Toolkit
  ☆316Updated last week
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆61Updated last week
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆35Updated this week
• HumanBrainProject / fairgraph
  High-level Python API for the EBRAINS Knowledge Graph
  ☆12Updated 2 weeks ago
• brain-web / brain-web.github.io
  A permanent online space for the community to meet&matcha, work&watermelon, catch up&coffee.
  ☆22Updated 3 weeks ago
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆51Updated 2 weeks ago
• NeuralEnsemble / neuroConstruct
  neuroConstruct: biophysically detailed neuronal modelling in 3D
  ☆51Updated 2 months ago
• project-improv / improv
  Adaptive Platform for Neuroscience Experiments
  ☆42Updated 2 months ago
• NeurodataWithoutBorders / pynwb-course
  Interactive Python course for using the Neurodata Without Borders format
  ☆15Updated 6 years ago
• jonescompneurolab / hnn
  The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on ci…
  ☆94Updated 3 months ago
• auto-pi-lot / autopilot
  Distributed behavioral experiments
  ☆95Updated 11 months ago
• the-virtual-brain / tvb-root
  Main TVB codebase
  ☆161Updated 3 weeks ago
• MetaCell / NetPyNE-UI
  NetPyNE User interface
  ☆23Updated last month
• catalystneuro / nwb-conversion-tools
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆25Updated 3 years ago
• INCF / neuroshapes
  Open schemas for F.A.I.R. neuroscience data
  ☆42Updated last year
• bonsai-rx / deeplabcut
  A Bonsai interface for real-time markerless pose estimation using DeepLabCut
  ☆53Updated 8 months ago
• AllenInstitute / dipde
  Numerical solver for coupled population density equations
  ☆25Updated 2 years ago
• HumanBrainProject / ebrains-storage
  Python client interface for EBRAINS Collaboratory Drive (Seafile) and Bucket (data-proxy) storage
  ☆11Updated 2 weeks ago
• ProjectPyRhO / PyRhO
  A virtual optogenetics laboratory
  ☆40Updated 2 years ago