Alternatives and similar repositories for openMINDS:

Users that are interested in openMINDS are comparing it to the libraries listed below

• openMetadataInitiative / openMINDS_core
  The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research prod…
  ☆21Updated last month
• FZJ-INM1-BDA / siibra-python
  Software interfaces for interacting with brain atlases - Python client
  ☆51Updated this week
• openMetadataInitiative / openMINDS_SANDS
  A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
  ☆13Updated last month
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆57Updated last week
• NeurodataWithoutBorders / pynwb
  A Python API for working with Neurodata stored in the NWB Format
  ☆194Updated this week
• INCF / neuroshapes
  Open schemas for F.A.I.R. neuroscience data
  ☆41Updated last year
• brainglobe / brainglobe-atlasapi
  A Python interface to access neuroanatomical atlases
  ☆147Updated this week
• NeurodataWithoutBorders / nwbinspector
  Tool to help inspect NWB files for compliance with NWB Best Practices
  ☆20Updated this week
• MetaCell / nwb-explorer
  NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files
  ☆24Updated 2 months ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆58Updated this week
• AllenInstitute / sonata
  Collaboration between BBP and AIBS
  ☆58Updated 9 months ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆55Updated last year
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated last week
• the-virtual-brain / tvb-root
  Main TVB codebase
  ☆132Updated 3 weeks ago
• MetaCell / NetPyNE-UI
  NetPyNE User interface
  ☆25Updated 8 months ago
• bonsai-rx / deeplabcut
  A Bonsai interface for real-time markerless pose estimation using DeepLabCut
  ☆50Updated 2 years ago
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆32Updated this week
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆49Updated 2 months ago
• datajoint / datajoint-tutorials
  Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
  ☆12Updated 3 months ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆57Updated last week
• neoanalysis / NeoAnalysis
  ☆25Updated 4 years ago
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆44Updated 6 months ago
• NeurodataWithoutBorders / nwb_tutorial
  Tutorials for learning NWB
  ☆17Updated 2 years ago
• INCF / neuroscience-data-structure
  Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …
  ☆21Updated 2 years ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆87Updated 3 weeks ago
• ProjectPyRhO / PyRhO
  A virtual optogenetics laboratory
  ☆36Updated last year
• neuromodulation / py_neuromodulation
  Real-time analysis of intracranial neurophysiology recordings.
  ☆52Updated this week
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆18Updated 8 months ago
• Neural-Systems-at-UIO / nutil
  https://nutil.readthedocs.io/en/latest/
  ☆12Updated this week
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆100Updated 5 months ago