darwinjob / pyramidio-bioformats
Image pyramid reader and writer enhanced with bio-formats library reader
☆13Updated last year
Alternatives and similar repositories for pyramidio-bioformats:
Users that are interested in pyramidio-bioformats are comparing it to the libraries listed below
- Bio-Formats image file format to raw format converter☆85Updated last week
- Raw format to OME-TIFF converter☆50Updated 3 weeks ago
- A fully scalable robust image feature extraction library.☆23Updated this week
- Python program to generate NetworkX graphs from segmented images.☆15Updated last year
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆24Updated 9 months ago
- Python project containing Ice remoting code for OMERO☆23Updated this week
- ☆35Updated last week
- A whole-slide image reader for TensorFlow☆23Updated 5 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆131Updated last month
- ☆22Updated last year
- Model repository for bioimage.io☆16Updated last year
- ☆62Updated last week
- multimodal whole slide image registration in a graph structure☆81Updated 8 months ago
- Python tools for creating and manipulating OME-TIFF multi-resolution pyramid images.☆14Updated this week
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 6 months ago
- ☆35Updated last week
- Aligning images acquired with the IBEX microscopy imaging technique☆17Updated 2 months ago
- Interface to the Bioformats Java library☆13Updated 2 months ago
- open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition☆27Updated 2 years ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆34Updated 11 months ago
- GPU-accelerated image processing for everyone☆51Updated 8 months ago
- Python API and Jupyter widget for Vitessce☆44Updated last month
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆35Updated last year
- Interactive visualization of spatial omics data☆52Updated this week
- ImgLib2 RealTransform brought to QuPath☆22Updated 4 months ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆118Updated this week
- A minimal Zarr image viewer based on Viv.☆142Updated 2 weeks ago
- ☆21Updated last month
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆51Updated 10 months ago