GGchen1997 / STEPS_BioinformaticsLinks
☆16Updated 2 years ago
Alternatives and similar repositories for STEPS_Bioinformatics
Users that are interested in STEPS_Bioinformatics are comparing it to the libraries listed below
Sorting:
- AlphaLink: Integrating crosslinking MS data into OpenFold☆71Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆40Updated 11 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 3 weeks ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆42Updated 10 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Updated 2 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- Antibody-specific masked language model☆63Updated 2 years ago
- Transformer Based Language Model for Peptide Property Prediction☆48Updated last year
- Docking Tool Benchmarking Workflow☆24Updated last year
- ☆29Updated 3 weeks ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆62Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Curated list on Deep Transformers Applications on Biology and Chemistry☆18Updated 2 years ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated 2 months ago
- ☆71Updated 3 weeks ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 7 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- ☆88Updated last year
- ☆91Updated last month
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆99Updated 3 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆29Updated last year
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago