ChakradharG / PeptideBERT
Transformer Based Language Model for Peptide Property Prediction
☆38Updated 7 months ago
Alternatives and similar repositories for PeptideBERT:
Users that are interested in PeptideBERT are comparing it to the libraries listed below
- ☆73Updated last month
- ☆31Updated last year
- ☆68Updated last year
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆74Updated 2 months ago
- ☆68Updated 4 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆50Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆45Updated 2 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆56Updated last year
- ☆43Updated 5 months ago
- Official repository of GENzyme☆42Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆50Updated 3 weeks ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆35Updated last year
- Making Protein folding accessible to all!☆21Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆41Updated 3 months ago
- ☆54Updated 11 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆42Updated 3 months ago
- ☆50Updated 2 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆66Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆26Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆38Updated 9 months ago
- Antibody-specific masked language model☆49Updated last year
- ☆31Updated 6 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆48Updated 6 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆99Updated this week
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆28Updated last month
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆28Updated this week
- AlphaFold-initiated replica exchange protein docking☆71Updated this week