Transformer Based Language Model for Peptide Property Prediction
☆51Aug 2, 2024Updated last year
Alternatives and similar repositories for PeptideBERT
Users that are interested in PeptideBERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web cards/apps describing peptides☆30Apr 26, 2023Updated 3 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆30May 10, 2025Updated last year
- ☆24Feb 20, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆14Nov 20, 2024Updated last year
- ☆18Oct 16, 2025Updated 6 months ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆34Jul 4, 2024Updated last year
- In silico directed evolution of peptide binders with AlphaFold☆267Apr 24, 2026Updated 2 weeks ago
- ☆40Mar 7, 2026Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- webserver☆29Jun 4, 2025Updated 11 months ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆11Feb 20, 2024Updated 2 years ago
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Dec 7, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Peptide library design☆23Sep 8, 2020Updated 5 years ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Sep 18, 2025Updated 7 months ago
- Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model☆16Jun 4, 2024Updated last year
- ☆13Aug 18, 2023Updated 2 years ago
- neuropeptide prediction☆14Sep 2, 2022Updated 3 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆126Oct 24, 2025Updated 6 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆67Apr 2, 2025Updated last year
- ☆15Sep 29, 2025Updated 7 months ago
- ☆17Feb 5, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆26Feb 23, 2026Updated 2 months ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆110Sep 17, 2025Updated 7 months ago
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- Screen interactions with AlphaFold Multimer☆14Mar 10, 2025Updated last year
- Code for peptide ligand design with machine learning models.☆34Dec 8, 2024Updated last year
- ☆13Dec 5, 2024Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆21Jan 15, 2024Updated 2 years ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Nov 10, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆27Aug 8, 2025Updated 9 months ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Collects software dedicated to predicting specific properties of peptides☆68Dec 17, 2024Updated last year
- ☆22May 15, 2025Updated 11 months ago
- ☆26May 19, 2024Updated last year
- Attentive deep learning model for antimicrobial peptide prediction☆62Apr 23, 2026Updated 2 weeks ago
- Rapid construction of chemical pipelines in interactive notebooks and cli usage☆13Sep 27, 2024Updated last year