AspirinCode / AlphaPPImd
Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
☆25Updated 5 months ago
Related projects ⓘ
Alternatives and complementary repositories for AlphaPPImd
- AlphaFold-initiated replica exchange protein docking☆45Updated 3 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆34Updated 4 months ago
- ☆38Updated 2 months ago
- ☆21Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated last month
- ☆20Updated last month
- ☆46Updated 9 months ago
- Code for humanization of antibody and nanobody☆23Updated 3 weeks ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆43Updated last week
- ☆45Updated 3 weeks ago
- ☆45Updated 5 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆26Updated 3 weeks ago
- ☆35Updated 10 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆20Updated 4 months ago
- Making Protein folding accessible to all!☆18Updated 10 months ago
- ☆74Updated last month
- ☆42Updated 7 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆23Updated 4 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆23Updated 3 months ago
- Tool for modelling the CDRs of antibodies☆45Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆25Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆64Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆62Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆33Updated 2 months ago
- ☆35Updated 11 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆24Updated 7 months ago
- ☆70Updated 6 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆37Updated 6 months ago