Curated list on Deep Transformers Applications on Biology and Chemistry
☆19Apr 8, 2023Updated 3 years ago
Alternatives and similar repositories for awesome-biochem-ai
Users that are interested in awesome-biochem-ai are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Highly accurate discovery of terpene synthases powered by machine learning☆17Jun 9, 2026Updated last month
- Easy & Pretrained SOTA Deep Learning for RNA strings☆12Apr 15, 2022Updated 4 years ago
- Code for the paper "Learning to engineer protein flexibility".☆22Mar 24, 2026Updated 4 months ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated 2 years ago
- B-cell Hybrid Immune Variant Engine☆12Jun 26, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆14Nov 23, 2024Updated last year
- Generate Dose-Response Curves in Python☆13May 26, 2026Updated 2 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆44Jun 28, 2021Updated 5 years ago
- ☆20Jan 20, 2023Updated 3 years ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆20May 23, 2025Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆56Dec 9, 2025Updated 7 months ago
- Repository for the usage of Squidly.☆15Jul 22, 2026Updated last week
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- Computational Chemistry☆27Jul 11, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆12Feb 20, 2026Updated 5 months ago
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆13Jul 8, 2025Updated last year
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆15Jun 24, 2026Updated last month
- ☆15Jun 3, 2021Updated 5 years ago
- ☆16May 27, 2026Updated 2 months ago
- Reaction-Conditioned Virtual Screening of Enzymes☆46Jun 13, 2026Updated last month
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆34Jun 10, 2026Updated last month
- Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures…☆19Jul 3, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆15Apr 30, 2025Updated last year
- ☆11May 2, 2022Updated 4 years ago
- Plotting mass spectra with Matplotlib☆35Nov 11, 2016Updated 9 years ago
- Python Data Science package for HeavyDB.☆22Jul 14, 2026Updated 2 weeks ago
- Interface-aware molecular generative framework for protein-protein interaction modulators☆20Dec 22, 2024Updated last year
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 6 months ago
- Dash HoloViews Example using Datashader and Linked Selections on the NYC Taxi Dataset☆14Dec 8, 2021Updated 4 years ago
- Official repository for the paper "Evaluating variant effect prediction across viruses"☆21Mar 30, 2026Updated 3 months ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 8 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A Novel Approach for Protein Sequence Design Based on Secondary Strucure☆24Mar 7, 2025Updated last year
- C++/Python Library for Systematic Chemical Space Exploration☆25Dec 21, 2021Updated 4 years ago
- [ICML2025] The official implementation of "WGFormer: An SE(3)-Transformer Driven by Wasserstein Gradient Flows for Molecular Ground-State…☆32Mar 18, 2026Updated 4 months ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆17Updated this week
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- Community-curated resources for research at the intersection of AI and molecular sciences☆18Aug 12, 2024Updated last year
- Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)☆33Feb 7, 2026Updated 5 months ago