opentargets / genetics-colocalisationLinks
Colocalisation pipeline for Open Targets Genetics
☆17Updated 3 years ago
Alternatives and similar repositories for genetics-colocalisation
Users that are interested in genetics-colocalisation are comparing it to the libraries listed below
Sorting:
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Code for implementing Mendelian randomization investigations☆20Updated 10 years ago
- Colocalization analysis of genetic association signals☆53Updated 7 months ago
- Mediated Expression Score Regression (MESC)☆27Updated 3 months ago
- Regional association plots☆26Updated last year
- ☆38Updated 5 years ago
- causal TWAS (cTWAS)☆47Updated 3 weeks ago
- ☆35Updated 2 years ago
- ☆24Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 3 years ago
- ☆20Updated 6 months ago
- ☆55Updated last week
- ☆36Updated 2 years ago
- ☆22Updated 3 weeks ago
- QTL Discovery using Annotations☆28Updated 3 years ago
- Genetics ToolboX R package☆32Updated 6 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆27Updated 2 years ago
- Regional association plots☆24Updated last year
- Upgrade to coloc☆13Updated 7 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- GWAS for survival analysis in large cohorts☆22Updated last year
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 2 months ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆24Updated 6 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Updated 4 years ago
- Code and simulations using interaction-LD score regression☆13Updated last year