opentargets / genetics-colocalisationLinks
Colocalisation pipeline for Open Targets Genetics
☆17Updated 3 years ago
Alternatives and similar repositories for genetics-colocalisation
Users that are interested in genetics-colocalisation are comparing it to the libraries listed below
Sorting:
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Regional association plots☆26Updated last year
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- ☆36Updated 4 years ago
- Colocalization analysis of genetic association signals☆52Updated 2 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- ☆33Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆24Updated 3 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated last week
- ☆23Updated 4 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆26Updated 3 weeks ago
- ☆48Updated 3 months ago
- ☆20Updated last month
- causal TWAS (cTWAS)☆45Updated 2 weeks ago
- ☆35Updated 2 years ago
- Regional association plots☆25Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 2 years ago
- Reading, querying and writing GWAS summary data in VCF format☆85Updated 2 months ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆24Updated 5 years ago
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆30Updated last year
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated last year
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago