Alternatives and similar repositories for iDNA_ABF:

Users that are interested in iDNA_ABF are comparing it to the libraries listed below

• liu-bioinfo-lab / EPCOT
  ☆19Updated last year
• mhorlacher / rbpnet
  ☆17Updated 10 months ago
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆14Updated 3 months ago
• karbalayghareh / GraphReg
  Chromatin interaction aware gene regulatory modeling with graph attention networks
  ☆23Updated last year
• Genentech / polygraph
  Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …
  ☆28Updated 3 weeks ago
• theislab / mubind
  Learning motif contributions to cell transitions using sequence features and graphs.
  ☆28Updated 5 months ago
• goodarzilab / SwitchFinder
  ☆14Updated 6 months ago
• shtoneyan / gopher
  Toolset for training quantitative sequence to function models.
  ☆21Updated 10 months ago
• zhanglhbioinfor / DIRECT-NET
  ☆10Updated last year
• jzhoulab / puffin_manuscript
  ☆17Updated 3 months ago
• Center-for-Health-Data-Science / multiDGD
  ☆23Updated 2 weeks ago
• huidongchen / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆18Updated 9 months ago
• marvinquiet / Cellcano
  Supervised cell type identification for scATAC-seq data
  ☆12Updated last year
• theislab / scTab
  ☆56Updated 4 months ago
• fratajcz / speos
  A positive-unlabeled ensemble learning framework for disease gene prioritization.
  ☆16Updated 2 months ago
• GET-Foundation / get_model
  A modular framework for multimodal cross-cell-type transcriptional regulation models
  ☆44Updated last week
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆23Updated 10 months ago
• zhanglab-wbgcas / STGRNS
  ☆29Updated last year
• BioX-NKU / scButterfly
  A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders
  ☆16Updated 7 months ago
• LieberInstitute / INTERACT
  ☆11Updated 2 years ago
• suinleelab / PAUSE
  Code for paper "Principled feature attribution for unsupervised gene expression analysis"
  ☆11Updated last year
• josephreplogle / guide_calling
  Tools for sgRNA calling in direct capture Perturb-seq data
  ☆31Updated last year
• cantinilab / scPRINT-old1
  Single Cell Pretrained Regulatory network INference from Transcripts
  ☆11Updated 4 months ago
• xiongxslab / Translatomer
  ☆17Updated last month
• bm2-lab / scMVP
  ☆28Updated 4 months ago
• FunctionLab / sei-manuscript
  Code for reproducing the Sei manuscript results
  ☆16Updated 3 years ago
• mcgilldinglab / CellAgentChat
  Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data
  ☆24Updated last month
• PYangLab / Matilda
  Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…
  ☆20Updated last month
• hemberg-lab / sc3s
  Single Cell Consensus Clustering with Speed
  ☆20Updated 2 years ago
• altoslabs / perturbench
  ☆22Updated 3 weeks ago