Czh3 / NGSToolsLinks
Next-Generation Sequencing(NGS) toolkits.
☆48Updated 9 years ago
Alternatives and similar repositories for NGSTools
Users that are interested in NGSTools are comparing it to the libraries listed below
Sorting:
- FEELnc : FlExible Extraction of LncRNA☆90Updated last month
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆48Updated 8 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆57Updated 2 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 3 months ago
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- phasing and Allele Specific Expression from RNA-seq☆116Updated last year
- A versatile aligning pipeline for bisulfite sequencing data☆65Updated 6 years ago
- BAM Statistics, Feature Counting and Annotation☆149Updated this week
- ☆89Updated 4 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- csf fork of fastqc for usage on selected reads of unaligned bam file☆48Updated 12 years ago
- Practical, reusable scripts for bioinformatics☆102Updated 6 years ago
- Relevant papers for CNV and SV approaches☆94Updated 9 months ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 7 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆83Updated 2 years ago
- My bioinfo toolbox☆50Updated 6 months ago
- web documentation for Trinotate☆48Updated 2 years ago
- This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are al…☆77Updated 5 years ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆88Updated 10 months ago
- ☆78Updated 11 years ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆144Updated 8 years ago
- Allele-specific alignment sorting☆58Updated 2 years ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Whole Genome Simulator for Next-Generation Sequencing☆100Updated 8 months ago