EskelandLab / ShinyArchRUiO
☆18Updated last year
Alternatives and similar repositories for ShinyArchRUiO:
Users that are interested in ShinyArchRUiO are comparing it to the libraries listed below
- ☆30Updated 2 months ago
- ☆46Updated 8 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- R package of CSOmap(developing☆14Updated 3 years ago
- ☆24Updated 5 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 9 months ago
- scWGCNA☆58Updated 2 years ago
- ☆16Updated 9 months ago
- ☆17Updated 7 months ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- ☆17Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆27Updated 4 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆19Updated 9 months ago
- ☆15Updated last year
- ☆54Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 3 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 4 months ago
- ☆47Updated 2 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- Repository for "Effective methods for bulk RNA-seq deconvolution using scRNA-seq and snRNA-seq derived transcriptomes"☆15Updated last year
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- single-cell clustering based on alternative splicing landscapes☆19Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆63Updated 5 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆55Updated 4 months ago
- ☆37Updated 3 years ago