Free collection of Bio datasets and embeddings
☆35Oct 10, 2022Updated 3 years ago
Alternatives and similar repositories for bio-datasets
Users that are interested in bio-datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A library for deploying App on deepchain.bio☆31Sep 24, 2021Updated 4 years ago
- bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.☆155Oct 11, 2023Updated 2 years ago
- Code of the paper: Debiasing Meta-Gradient Reinforcement Learning by Learning the Outer Value Function☆13Apr 13, 2026Updated 4 months ago
- 🧬 ManyFold: An efficient and flexible library for training and validating protein folding models☆80Dec 14, 2022Updated 3 years ago
- NLP for Proteins - A paper collection☆13Sep 10, 2020Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 🐈⬛ Contextual bandits library for continuous action trees with smoothing in JAX☆71Jul 28, 2026Updated last month
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Nov 12, 2021Updated 4 years ago
- 🪐 The Sebulba architecture to scale reinforcement learning on Cloud TPUs in JAX☆61Aug 22, 2026Updated last week
- JavaScript library for biological data visualization☆20Oct 12, 2018Updated 7 years ago
- LightMHC: A Light Model for pMHC Structure Prediction with Graph Neural Networks☆13Jan 9, 2024Updated 2 years ago
- MaveDB database web application☆13Nov 17, 2023Updated 2 years ago
- Population-Based Reinforcement Learning for Combinatorial Optimization☆88Feb 12, 2024Updated 2 years ago
- These are the famous Uppsala Software Factory programs, rescued into GitHub.☆10Nov 3, 2022Updated 3 years ago
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Apr 22, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Javascript package for embedding sequence logos☆19Jun 16, 2025Updated last year
- BlasterJS - an open source JS library to display Blast results☆21Oct 18, 2019Updated 6 years ago
- A high level cheminformatics package for the Scientific Python stack, built on RDKit.☆63Apr 1, 2020Updated 6 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- A toolkit for practical Human-AI cooperation research☆15Apr 19, 2024Updated 2 years ago
- Deep Learning Tools for Design of Biologic Therapeutics☆16Jul 15, 2017Updated 9 years ago
- Generated color schemes for sequence alignment visualizations☆18Jul 20, 2022Updated 4 years ago
- TiTiler demo APP with Sentinel and Landsat AWS Public Datasets☆15Jan 29, 2024Updated 2 years ago
- Visualize sequence and multiple sequence alignment (MSA)☆15May 30, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Models and training scripts for the English, German and Russian MAGEC systems described in R. Grundkiewicz, M. Junczys-Dowmunt: Minimally…☆12Jul 7, 2021Updated 5 years ago
- BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)☆15Apr 24, 2026Updated 4 months ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- COMPASS: Combinatorial Optimization with Policy Adaptation using Latent Space Search☆47Jun 21, 2024Updated 2 years ago
- web viewer for plasmid DNA, RNA, and proteins☆16Jun 16, 2017Updated 9 years ago
- Code in Clustering Review Ronan et al. 2016☆13Mar 10, 2016Updated 10 years ago
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 4 years ago
- Code associated with our paper "Learning Group Structure and Disentangled Representations of Dynamical Environments"☆15Dec 8, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Motif Transformers for Predicting Protein-Protein Interactions Between a Novel Virus and Humans☆10Dec 4, 2024Updated last year
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- A library for converting molecular topologies☆13May 20, 2015Updated 11 years ago
- ProtGraph - A Graph-Generator for Proteins☆13Mar 4, 2026Updated 5 months ago
- Free and open-source collapsible, air-line compliant communications tower☆24Jul 4, 2014Updated 12 years ago