𧬠ManyFold: An efficient and flexible library for training and validating protein folding models
β80Dec 14, 2022Updated 3 years ago
Alternatives and similar repositories for manyfold
Users that are interested in manyfold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- πββ¬ Contextual bandits library for continuous action trees with smoothing in JAXβ71Oct 7, 2022Updated 3 years ago
- πͺ The Sebulba architecture to scale reinforcement learning on Cloud TPUs in JAXβ63Oct 23, 2023Updated 2 years ago
- Free collection of Bio datasets and embeddingsβ35Oct 10, 2022Updated 3 years ago
- Population-Based Reinforcement Learning for Combinatorial Optimizationβ87Feb 12, 2024Updated 2 years ago
- The code for NeurIPS 2023 paper DSRβ14Oct 8, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Official Implementation of Mementoβ21Nov 19, 2024Updated last year
- A neural network library written in jaxβ13Feb 3, 2025Updated last year
- πΉοΈ A diverse suite of scalable reinforcement learning environments in JAXβ832Apr 13, 2026Updated last month
- bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.β155Oct 11, 2023Updated 2 years ago
- Code of the paper: Debiasing Meta-Gradient Reinforcement Learning by Learning the Outer Value Functionβ13Apr 13, 2026Updated last month
- Foundation Models for Genomics & Transcriptomicsβ871Feb 24, 2026Updated 2 months ago
- β‘ Flashbax: Accelerated Replay Buffers in JAXβ279Sep 22, 2025Updated 8 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictionsβ173Dec 24, 2023Updated 2 years ago
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://wwwβ¦β17Jan 17, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A categorised list of Multi-Agent Reinforcemnt Learning (MARL) papersβ58Jan 20, 2023Updated 3 years ago
- Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"β53Mar 3, 2025Updated last year
- A collection of *fold* toolsβ305Aug 8, 2025Updated 9 months ago
- Get protein embeddings from protein sequencesβ508Apr 28, 2023Updated 3 years ago
- Python package to manage protein structures and their annotationsβ46Mar 18, 2026Updated 2 months ago
- A library for deploying App on deepchain.bioβ31Sep 24, 2021Updated 4 years ago
- Library for efficient training and application of Machine Learning Interatomic Potentials (MLIP)β96Apr 2, 2026Updated last month
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models β¦β273Apr 27, 2025Updated last year
- OmegaFold Release Codeβ622Dec 12, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Explore protein fold space with deep generative modelsβ16Aug 5, 2024Updated last year
- awesome tools for RNAβ17Nov 15, 2022Updated 3 years ago
- π¦ A research-friendly codebase for fast experimentation of multi-agent reinforcement learning in JAXβ911May 11, 2026Updated last week
- Python tool for the discovery of similar 3D structural motifs across protein structures.β36Nov 18, 2023Updated 2 years ago
- Insights into the inner workings of transformer models for protein function predictionβ14Feb 9, 2024Updated 2 years ago
- Biological prediction models made simple.β50Updated this week
- SE(3)-equivariant point cloud networks for virtual screeningβ11Nov 1, 2022Updated 3 years ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Maβ¦β100Jan 24, 2023Updated 3 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody sβ¦β13Sep 21, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experimentsβ118Apr 10, 2026Updated last month
- cfrx is a collection of algorithms and tools for hardware-accelerated Counterfactual Regret Minimization (CFR) algorithms in Jax.β37Mar 11, 2026Updated 2 months ago
- β15Dec 21, 2021Updated 4 years ago
- Repository for publicly available deep learning models developed in Rosetta communityβ123Sep 18, 2021Updated 4 years ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoningβ28Jul 14, 2023Updated 2 years ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit aβ¦β1,307May 22, 2025Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteinsβ180Updated this week