DagmarIlz / SETHLinks
ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins
☆11Updated last year
Alternatives and similar repositories for SETH
Users that are interested in SETH are comparing it to the libraries listed below
Sorting:
- ☆25Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Fast and accurate protein structure prediction☆56Updated 10 months ago
- Python package to manage protein structures and their annotations☆45Updated last year
- A program fror inter-protein contact prediction from structures of interacting proteins☆19Updated last year
- The DSSP building software☆47Updated 2 years ago
- Machine learning-driven antibody design☆62Updated 2 years ago
- ☆44Updated last year
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24Updated last year
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Ultra-fast in-silico structure mutation☆36Updated 8 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 6 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- Contact map alignment☆41Updated 4 years ago
- Physical energy function for protein sequence design☆34Updated 2 years ago
- Kuhlman Lab Installation of AlphaFold3☆37Updated 2 months ago
- ☆21Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- Graph Network for protein-protein interface including language model features☆33Updated last year
- A high performance drop-in replacement for Biotite's PDBFile.☆41Updated 6 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated last week
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆59Updated 3 months ago
- Tools for annotation, processing and ML for antibody sequences☆34Updated this week
- ☆23Updated 3 weeks ago
- ML toolset for creating TED: The Encyclopedia of Domains☆24Updated 6 months ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆31Updated 2 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆28Updated 9 months ago