☆16Aug 3, 2023Updated 3 years ago
Alternatives and similar repositories for hydrophobic_patches
Users that are interested in hydrophobic_patches are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Physical energy function for ddG prediction upon amino acid mutation☆15May 7, 2023Updated 3 years ago
- Notebook tutorials for MolecularGraph.jl☆12Jun 22, 2025Updated last year
- MDplot: Visualise Molecular Dynamics☆32Mar 23, 2022Updated 4 years ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆32Oct 6, 2022Updated 4 years ago
- Discrete Cosine Spectral Diffusion for Protein Dynamics☆15Aug 31, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆11Oct 29, 2025Updated last year
- Scores for Hydrophobicity and Charges based on SASAs☆47Jun 12, 2025Updated last year
- Assessing the impact of mutations on antibody-antigen binding affinity☆18Dec 7, 2020Updated 5 years ago
- PPI Affinity Prediction☆12Nov 15, 2025Updated 11 months ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Jan 2, 2023Updated 3 years ago
- DeepSoluE☆18Sep 18, 2023Updated 3 years ago
- ☆15Sep 4, 2026Updated last month
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated 2 years ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆16Sep 8, 2023Updated 3 years ago
- ☆20Sep 15, 2026Updated last month
- ☆15Jun 26, 2018Updated 8 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆15Oct 17, 2025Updated last year
- Protein-protein binding affinity benchmark☆20Feb 14, 2025Updated last year
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Nov 17, 2022Updated 3 years ago
- Material to run the HADDOCK antibody-antigen modelling protocol☆23Apr 13, 2026Updated 6 months ago
- Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.☆26May 9, 2024Updated 2 years ago
- ☆13Jun 9, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Sep 21, 2023Updated 3 years ago
- Generate and perturb protein structural ensembles using the ExProSE algorithm☆24Oct 23, 2024Updated 2 years ago
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆30Mar 30, 2023Updated 3 years ago
- DeepContact Software☆26Jun 16, 2018Updated 8 years ago
- ☆13May 13, 2022Updated 4 years ago
- Protein solubility prediction tools☆24Dec 13, 2024Updated last year
- NLP for Proteins - A paper collection☆13Sep 10, 2020Updated 6 years ago
- ☆26May 14, 2019Updated 7 years ago
- Direct coupling analysis software for protein and RNA sequences☆61Jul 21, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- web based visualisation of molecular interaction data☆12Updated this week
- An attempt to make HLA typing from OxfordNanopore reads (MinION platform)☆13Aug 20, 2018Updated 8 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆16May 25, 2017Updated 9 years ago
- PCA and normal mode analysis of proteins☆21May 16, 2024Updated 2 years ago
- Solvent Accessible Surface calculation software for biomolecules.☆20Apr 23, 2023Updated 3 years ago
- ☆12Mar 31, 2023Updated 3 years ago
- ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins☆13Mar 11, 2024Updated 2 years ago