ibivu / hydrophobic_patchesView external linksLinks
☆12Aug 3, 2023Updated 2 years ago
Alternatives and similar repositories for hydrophobic_patches
Users that are interested in hydrophobic_patches are comparing it to the libraries listed below
Sorting:
- Notebook tutorials for MolecularGraph.jl☆11Jun 22, 2025Updated 7 months ago
- web based visualisation of molecular interaction data☆12May 22, 2025Updated 8 months ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆31Dec 18, 2025Updated last month
- Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.☆25May 9, 2024Updated last year
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆27Jan 8, 2024Updated 2 years ago
- ☆31Aug 16, 2021Updated 4 years ago
- ☆33Jun 1, 2024Updated last year
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Jul 28, 2022Updated 3 years ago
- ☆11Oct 25, 2024Updated last year
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 2 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆41Aug 29, 2025Updated 5 months ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- An `AbstractTestSet` implementation and a helper macro for test execution with auto discovery and a neater test summary.☆11Dec 6, 2024Updated last year
- Screen interactions with AlphaFold Multimer☆13Mar 10, 2025Updated 11 months ago
- ☆10Sep 17, 2024Updated last year
- Performs BLAST on compressed proteomic data.☆17Jun 15, 2015Updated 10 years ago
- Elastic and fault tolerant parallel map and parallel map reduce methods. Part of the COFII framework.☆16Aug 6, 2025Updated 6 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 4 months ago
- E(3) equivariant graph neural network for PPI site prediction☆10Sep 18, 2023Updated 2 years ago
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated this week
- A tool for divide-and-conquer tree estimation via a shared distance matrix☆10Mar 19, 2019Updated 6 years ago
- Table of Multiplexed Assay of Variant Effect (MAVE) studies☆11Feb 21, 2023Updated 2 years ago
- GLEE: Geometric Laplacian Eigenmap Embedding☆11Mar 7, 2020Updated 5 years ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Dec 11, 2021Updated 4 years ago
- A Julia package for frequency domain analysis of time series☆13May 15, 2025Updated 9 months ago
- Mutation Spectra Analysis☆10Mar 15, 2018Updated 7 years ago
- Benchmarking common tasks on proteins in various languages and packages☆42Dec 27, 2020Updated 5 years ago
- Create a citation graph from pubmed data using R☆10Nov 4, 2016Updated 9 years ago
- ☆10Dec 4, 2021Updated 4 years ago
- A Julia implementation of ▁▂▃▅▂▇ spark: simple printing of unicode trendlines☆10Nov 24, 2018Updated 7 years ago
- Estimate PTM hotspots in protein sequence alignments☆14Feb 6, 2019Updated 7 years ago
- The SimSite3D Software tools are designed to quickly search a database of three dimensional structures, in Protein Data Bank format, with…☆11Oct 18, 2018Updated 7 years ago
- Rigorous moment propagation with partial information about moments and dependencies in Julia☆12May 7, 2022Updated 3 years ago
- Fake genomes, fake sequencing, real insights.☆13Sep 4, 2021Updated 4 years ago
- The BiomolecularStructures package provides several Bioinformatics-related modules for Julia.☆12Jun 13, 2017Updated 8 years ago
- A Julia package for evaluation of divergences between distributions☆10Feb 2, 2026Updated 2 weeks ago
- Graph-building for AtomicGraphNets☆12Nov 20, 2023Updated 2 years ago
- ☆11Sep 2, 2024Updated last year