conradry / prtmLinks
Deep learning for protein science
☆38Updated last year
Alternatives and similar repositories for prtm
Users that are interested in prtm are comparing it to the libraries listed below
Sorting:
- AlphaLink: Integrating crosslinking MS data into OpenFold☆72Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated 2 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 10 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ☆51Updated 2 years ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆63Updated 3 months ago
- ☆37Updated 2 years ago
- ☆47Updated last year
- A Unified Approach to Protein Engineering☆41Updated last year
- Tool for modelling the CDRs of antibodies☆50Updated 3 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆86Updated 3 months ago
- The DSSP building software☆50Updated 2 years ago
- ☆74Updated last year
- Protein Structure Analysis☆63Updated 4 months ago
- ☆56Updated 5 months ago
- Ultra-fast in-silico structure mutation☆36Updated 9 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- ☆74Updated 10 months ago
- Metrics for our protein design competitions.☆35Updated last year
- Python interface for the RCSB PDB search API.☆65Updated 10 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- random colab notebooks for biology☆26Updated 5 months ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Collection of useful bioinformatic functions and tools for various computational biology pipelines☆39Updated this week
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated this week
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- Graph Network for protein-protein interface including language model features☆34Updated last year