conradry / prtm
Deep learning for protein science
☆34Updated 11 months ago
Alternatives and similar repositories for prtm:
Users that are interested in prtm are comparing it to the libraries listed below
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 3 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆51Updated 5 months ago
- ☆38Updated 3 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆24Updated 2 months ago
- Tools for annotation, processing and ML for antibody sequences☆27Updated last week
- ☆21Updated last year
- Efficient manipulation of protein structures in Python☆53Updated 6 months ago
- ☆45Updated last year
- Tool for modelling the CDRs of antibodies☆47Updated 2 years ago
- Machine learning-driven antibody design☆55Updated last year
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆51Updated 9 months ago
- Source code and examples for AlphaFold Unmasked☆62Updated 3 weeks ago
- A Unified Approach to Protein Engineering☆41Updated 10 months ago
- ☆39Updated last year
- Predict the structure of immune receptor proteins☆48Updated 6 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆54Updated last month
- Repo contains source code of the SurfaceID paper☆22Updated last year
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 2 years ago
- Structure prediction of alternative protein conformations☆75Updated 2 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆70Updated 8 months ago
- ☆66Updated last month
- ☆76Updated last month
- ☆49Updated last month
- Python package to manage protein structures and their annotations☆42Updated last year
- Kuhlman Lab Installation of AlphaFold3☆25Updated last month
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆26Updated 6 months ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆25Updated 2 years ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆30Updated 2 weeks ago
- ☆35Updated last year
- random colab notebooks for biology☆26Updated last month