Alternatives and similar repositories for prtm

Users that are interested in prtm are comparing it to the libraries listed below

• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆72Updated 2 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆63Updated 2 years ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆78Updated 3 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆39Updated this week
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆63Updated 4 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆63Updated 3 months ago
• AbSciBio / igdesign
  ☆47Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆29Updated 11 months ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆86Updated 3 months ago
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆72Updated 2 years ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 10 months ago
• cmbi / dssp
  The DSSP building software
  ☆50Updated 2 years ago
• KULL-Centre / _2024_cagiada_stability
  ☆74Updated 10 months ago
• Exscientia / abodybuilder3
  ☆74Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆36Updated 10 months ago
• bwicky / oligomer_hallucination
  ☆37Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• manifoldbio / mber-open
  mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…
  ☆99Updated 3 weeks ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 10 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆41Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆56Updated 5 months ago
• biotite-dev / fastpdb
  A high performance drop-in replacement for Biotite's PDBFile.
  ☆41Updated 8 months ago
• aqlaboratory / rgn2
  ☆109Updated 2 years ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆76Updated 2 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆34Updated last year
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆42Updated last year
• Faezov / PDBrenum
  ☆30Updated 8 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 3 years ago