DRL / blobtools-lightLinks
Light version blobtools package - NO LONGER MAINTAINED! DO NOT USE!
☆8Updated 9 years ago
Alternatives and similar repositories for blobtools-light
Users that are interested in blobtools-light are comparing it to the libraries listed below
Sorting:
- Pipeline for Evaluating Prokaryotic References☆11Updated 8 years ago
- Genomic Assemblies Merger for NGS☆26Updated last year
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- Indel-aware consensus for aligned BAM☆21Updated 2 months ago
- blast, shmlast☆22Updated 4 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 3 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 5 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Read nanopore sequence reads in real-time☆14Updated 8 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Updated 6 months ago
- Tool for visualising assemblies.☆17Updated 9 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated 2 weeks ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 6 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last year
- ☆12Updated last month
- A list of weak Bacterial assemblies in GenBank☆18Updated 7 years ago
- ☆19Updated 8 years ago
- genomic alignment similarity search tool☆18Updated 3 weeks ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- INC-Seq: Accurate single molecule reads using nanopore sequencing☆15Updated 4 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Updated 7 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 11 months ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- comparative genome dot plot viewer☆9Updated 6 years ago
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13Updated 9 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago