chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
☆40Aug 18, 2026Updated last month
Alternatives and similar repositories for chimeraviz
Users that are interested in chimeraviz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package to annotate and visualize gene fusions.☆66Apr 14, 2026Updated 5 months ago
- FusionInspector code☆64May 21, 2026Updated 4 months ago
- JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions☆118Aug 25, 2026Updated last month
- Gene Fusion Visualiser☆53Jan 15, 2023Updated 3 years ago
- ☆16May 8, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Annotates variants in MAF with OncoKB annotation.☆147Aug 25, 2026Updated last month
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Jun 11, 2026Updated 3 months ago
- Finder of Somatic Fusion Genes in RNA-seq data☆154Apr 16, 2026Updated 5 months ago
- Mutational Signature Comprehensive Analysis Toolkit☆16Updated this week
- single-nucleus nanopore reads processing pipeline☆16Aug 16, 2023Updated 3 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆37Jul 30, 2020Updated 6 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆76Aug 22, 2023Updated 3 years ago
- Fast and accurate gene fusion detection from RNA-Seq data☆278Sep 21, 2025Updated last year
- STAR-Fusion codebase☆255Apr 18, 2026Updated 5 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Python function for TMB snake plots☆16Feb 12, 2026Updated 7 months ago
- for visual evaluation of read support for structural variation☆56Jun 4, 2024Updated 2 years ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- Read visualizer for structural variants☆85Aug 18, 2018Updated 8 years ago
- Third-generation fusion gene detection☆13Sep 10, 2026Updated 2 weeks ago
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆13Jul 1, 2026Updated 2 months ago
- Pan gGnome Viewer☆10Updated this week
- Fast fusion detection using kallisto☆80Jun 11, 2025Updated last year
- CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.☆44Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆53Apr 8, 2022Updated 4 years ago
- Filter and prioritize fusion calls☆21May 26, 2026Updated 4 months ago
- Molecular analysis of pre-invasive lung cancer samples☆14Jan 18, 2019Updated 7 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 10 years ago
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- This is a read-only mirror of the CRAN R package repository. sequenza — Copy Number Estimation from Tumor Genome Sequencing Data. Homep…☆22May 9, 2019Updated 7 years ago
- Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)☆17Jan 15, 2020Updated 6 years ago
- structure detection program☆18Nov 20, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆12Apr 26, 2020Updated 6 years ago
- Filters for false-positive mutation calls in NGS☆34Apr 12, 2019Updated 7 years ago
- Immunology-related bioinformatics data and tools☆75Apr 30, 2024Updated 2 years ago
- ☆11Dec 20, 2024Updated last year
- Collection of fragmentomic analysis scripts☆14Jul 3, 2024Updated 2 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Mar 20, 2025Updated last year