Alternatives and similar repositories for AFM-LIS

Users that are interested in AFM-LIS are comparing it to the libraries listed below

• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆53Updated 2 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 4 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated this week
• bene837 / af2seq
  ☆44Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆85Updated 2 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆84Updated 4 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last month
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆63Updated last month
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆91Updated this week
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆98Updated last month
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 7 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆64Updated last year
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆74Updated last month
• Exscientia / abodybuilder3
  ☆68Updated last year
• hefeda / PGP
  ☆42Updated 2 months ago
• AbSciBio / igdesign
  ☆47Updated 9 months ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆35Updated 6 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆36Updated 3 weeks ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 11 months ago
• dina-lab3D / CombFold
  ☆87Updated last year
• cddlab / alphafold3_tools
  Toolkit for alphafold3 input and output files
  ☆83Updated 3 weeks ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆97Updated 2 years ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆82Updated last year
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆140Updated 2 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆74Updated this week
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 3 months ago
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆54Updated 6 months ago