Alternatives and similar repositories for AFM-LIS

Users that are interested in AFM-LIS are comparing it to the libraries listed below

• Kuhlman-Lab / evopro
  ☆81Updated last month
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆50Updated 3 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆67Updated 10 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆58Updated 4 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆61Updated 7 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated 5 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 3 months ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆63Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 3 weeks ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆109Updated 6 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆127Updated 2 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated 11 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆58Updated 5 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 8 months ago
• bene837 / af2seq
  ☆43Updated 10 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆78Updated last year
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆83Updated last month
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆33Updated 8 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆45Updated 2 months ago
• Exscientia / abodybuilder3
  ☆58Updated 8 months ago
• AbSciBio / igdesign
  ☆41Updated 6 months ago
• dina-lab3D / CombFold
  ☆84Updated 9 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆59Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 3 months ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆79Updated last month
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆86Updated 11 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆27Updated 2 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated last month
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆96Updated last year
• hefeda / PGP
  ☆39Updated last month