DeepMicroscopy / ExactLinks
An open source online platform for collaborative image labeling of almost everything
☆62Updated this week
Alternatives and similar repositories for Exact
Users that are interested in Exact are comparing it to the libraries listed below
Sorting:
- A deep-learning pipeline for segmentation of ambiguous microscopic images.☆63Updated 8 months ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆80Updated 6 months ago
- Material for the 2020 MONAI Bootcamp☆65Updated 5 years ago
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆32Updated 3 years ago
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Benchmarking toolkit for patch-based histopathology image classification.☆43Updated 2 years ago
- Predict the status of a genetic biomarker important for brain cancer treatment☆39Updated 4 months ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆78Updated 3 years ago
- Differences between human and machine perception in medical diagnosis☆33Updated 4 years ago
- COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations☆158Updated 3 years ago
- A generalizable application framework for segmentation, regression, and classification using PyTorch☆189Updated 5 months ago
- DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration☆46Updated 5 years ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Updated 4 years ago
- A tool for training machine-learning models with whole-slide imaging datasets☆26Updated 2 years ago
- Notebooks for VoidSeg☆17Updated 5 years ago
- Dense Steerable Filter CNN☆77Updated 3 years ago
- 2D Vector-Quantized Auto-Encoder for compression of Whole-Slide Images in Histopathology☆16Updated last year
- BIRL: Benchmark on Image Registration methods with Landmark validations☆94Updated 4 years ago
- A regular Tiramisu network for PyTorch with a LOT of extra features!☆42Updated 4 years ago
- EfficientNets in 3D variant for keras and TF.keras☆54Updated 4 years ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Updated 3 years ago
- Web-based app for labeling DICOM files in Python.☆21Updated 2 years ago
- Core functionality of Eisen☆42Updated 5 years ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Updated 3 years ago
- Gifsplanation - Explaining neural networks with gifs!☆27Updated 2 years ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Updated this week
- 3D volume data augmentation package inspired by albumentations☆81Updated 6 years ago
- Robust quad-tree based registration on whole slide images☆21Updated 10 months ago
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆49Updated 3 years ago
- Code accompanying the paper Neural Image Compression for Gigapixel Histopathology Image Analysis☆49Updated 2 years ago