Booritas / slideio-tutorialLinks
Tutorial for slideio package
☆14Updated last year
Alternatives and similar repositories for slideio-tutorial
Users that are interested in slideio-tutorial are comparing it to the libraries listed below
Sorting:
- Tools to build deep learning pipelines.☆113Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated 2 years ago
- ☆31Updated last year
- Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF☆25Updated 5 months ago
- List of pathology feature extractors and foundation models☆167Updated last week
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆27Updated 5 months ago
- Virtual Alignment of pathoLogy Image Series☆205Updated 7 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆44Updated 9 months ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆358Updated 6 months ago
- Awesome List of Digital and Computational Pathology Resources☆103Updated last year
- Segment Anything for Histopathology☆58Updated 4 months ago
- Stain normalization tools for histological analysis and computational pathology☆174Updated 2 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- ☆36Updated 10 months ago
- Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms☆39Updated this week
- Solid Tumor Associative Modeling in Pathology☆110Updated last week
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 5 years ago
- Toolkit for large-scale whole-slide image processing.☆482Updated 2 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆133Updated this week
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆234Updated 3 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆37Updated last year
- QuPath extension for Segment Anything Model (SAM)☆126Updated this week
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆164Updated 2 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆504Updated this week
- Codebase for "A Foundation Model for Cell Segmentation"☆174Updated 2 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆318Updated last month
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆109Updated 3 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆161Updated last year