andreped / vsi2tif
Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF
☆20Updated 3 months ago
Alternatives and similar repositories for vsi2tif
Users that are interested in vsi2tif are comparing it to the libraries listed below
Sorting:
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆68Updated last year
- ☆32Updated last month
- Solid Tumor Associative Modeling in Pathology☆74Updated last week
- Tools to build deep learning pipelines.☆102Updated 6 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆28Updated last year
- Virtual Alignment of pathoLogy Image Series☆156Updated 5 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆62Updated 3 months ago
- List of pathology feature extractors and foundation models☆124Updated 3 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 3 months ago
- Pipeline for computational pathology☆35Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆99Updated 3 months ago
- DeeperHistReg - Source Code☆59Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆69Updated 10 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆39Updated 5 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆82Updated 2 months ago
- Re-stained whole slide image alignment☆33Updated last year
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated 11 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last month
- First commit☆61Updated 2 years ago
- Histopathology Image Analysis☆92Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆91Updated last week
- A tool for rapidly labeling objects using deep learning feature embedding☆32Updated 9 months ago
- Awesome List of Digital and Computational Pathology Resources☆53Updated 4 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆101Updated 5 months ago
- GrandQC tool for tissue detection and quality control in pathology☆46Updated 2 months ago
- ☆17Updated last year
- ☆55Updated 3 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆19Updated 10 months ago
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆25Updated last year
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year