Alternatives and similar repositories for AlphaFold-disorder

Users that are interested in AlphaFold-disorder are comparing it to the libraries listed below

• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆30Updated 2 years ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆25Updated last year
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆77Updated 6 months ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆109Updated last year
• jproney / AF2Rank
  ☆111Updated 2 years ago
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 5 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆31Updated last year
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆96Updated 2 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 4 months ago
• dina-lab3D / CombFold
  ☆85Updated 11 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆53Updated 4 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 2 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆51Updated 3 weeks ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆73Updated 3 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆131Updated last week
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆30Updated 3 months ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆91Updated 2 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated 3 months ago
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆87Updated last year
• Graylab / deepH3-distances-orientations
  ☆35Updated 3 years ago
• AbSciBio / igdesign
  ☆46Updated 7 months ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated last year
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆79Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆68Updated last year
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago