A collection of tools for the analysis of biological data
☆12Mar 22, 2016Updated 10 years ago
Alternatives and similar repositories for Farsight-toolkit
Users that are interested in Farsight-toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 2D/3D biopolymer network extraction and quantification.☆16Mar 29, 2026Updated last month
- Example CellProfiler pipelines.☆19Jul 19, 2022Updated 3 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Apr 20, 2026Updated last week
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 5 years ago
- The repository of NEUBIAS textbook 2021☆11Jan 24, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Volumetric vessel segmentation with convolutional networks (Teikari et al., 2016, arXiv:1606.02382). ZNN framework, 3D architecture☆14Feb 16, 2026Updated 2 months ago
- an innovative strategy for missense mutant protein structures prediction based on AlphaFold2 and Molecular Dynamics Simulation☆13May 21, 2024Updated last year
- Open Vertical Seismic Profiling (VSP) data for deep learning geophysics. #AI for science#☆11Apr 5, 2023Updated 3 years ago
- IMCMCrun is used to perform a seismic inversion using a fast eikonal solver and interactive markov chains algorithm. TODO add reference …☆14Mar 31, 2018Updated 8 years ago
- A simple seismic viewer using the SEGY standard with mapping capabilities, frequency and Wigner-Ville spectra calculations on the fly.☆10Nov 25, 2017Updated 8 years ago
- ☆11Nov 17, 2018Updated 7 years ago
- Jupyter notebooks for CellProfiler and friends☆14Mar 23, 2018Updated 8 years ago
- Researching the forward-backward algorithm☆11Aug 3, 2018Updated 7 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Feb 17, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Julia library for fitting and analyzing state space models. Provides efficient implementations of various SSMs including the canonical Ga…☆37Updated this week
- MD Diffusion: Diffusion Models for Multidimensional Seismic Noise Attenuation and Super-Resolution☆16Sep 24, 2024Updated last year
- Advanced Tool for Labeling And Segmentation☆40Oct 21, 2024Updated last year
- Seismic event picking using Matplotlib and machine learning☆14Oct 22, 2017Updated 8 years ago
- Use the tokenizer in parallel to achieve superior acceleration☆20Mar 21, 2024Updated 2 years ago
- This is a python implementation of Hierarchical Image Matting Model for Segmentation.☆11Jun 21, 2022Updated 3 years ago
- SEAM I open sourced 2D line for creating synthetic prestack seismic☆12Dec 22, 2018Updated 7 years ago
- Neural style transfer applied to elastic subsurface models [SEG19]. Visualized and explained.☆15Mar 10, 2020Updated 6 years ago
- Single-channel microseismic denoising using dictionary learning - applications to arrival picking and source location☆18Nov 9, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆21Updated this week
- ☆17Dec 4, 2025Updated 4 months ago
- A software to model seismic reflection data from fractured medium☆14May 5, 2020Updated 5 years ago
- Nonlinear Estimation Toolbox☆15Feb 28, 2023Updated 3 years ago
- ☆10Oct 14, 2016Updated 9 years ago
- Matlab package implementing blind deconvolution method for neural spike recovery☆14Sep 20, 2016Updated 9 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- Intel TBB Package for R/Rcpp☆15Jul 7, 2014Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Beginner's introduction to the pandas library for data manipulation☆29May 30, 2021Updated 4 years ago
- A set of Python class implementing basic several turbo-algorithms (e.g. : turbo-decoding)☆13Aug 31, 2020Updated 5 years ago
- Kirchhoff Migration (PSTM)☆17Oct 13, 2023Updated 2 years ago
- US Neighborhood data in GeoJSON format from OpenSource Zillow Neighborhood Boundaries Shapefiles☆11Oct 27, 2016Updated 9 years ago
- Full waveform Inversion for microseismic events using sparsity constraints☆13Apr 15, 2019Updated 7 years ago
- this is the code implementation of "SeisFusion: Constrained Diffusion Model with Input Guidance for 3D Seismic Data Interpolation and Rec…☆17Oct 9, 2024Updated last year
- Linear Radon Transform (Slant stack) and its high-resolution version for dispersion curve estimation☆21Jul 15, 2023Updated 2 years ago