Alternatives and similar repositories for BioLLM:

Users that are interested in BioLLM are comparing it to the libraries listed below

• theislab / scTab
  ☆58Updated 7 months ago
• lanagarmire / Asgard
  ☆42Updated last year
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆52Updated 6 months ago
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆57Updated 10 months ago
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆13Updated 6 months ago
• cantinilab / scPRINT
  single cell foundation model for Gene network inference and more
  ☆65Updated last week
• Genentech / decima
  Decima is a Python library to train sequence models on single-cell RNA-seq data.
  ☆33Updated last week
• cantinilab / HuMMuS
  Molecular interactions inference from single-cell multi-omics data
  ☆24Updated this week
• QuKunLab / MultiomeBenchmarking
  ☆43Updated last month
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆51Updated last month
• theislab / multimil
  Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases
  ☆30Updated this week
• Papatheodorou-Group / BENGAL
  Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets
  ☆37Updated last year
• TencentAILabHealthcare / scTranslator
  ☆36Updated 8 months ago
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• theislab / prophet
  ☆30Updated this week
• pinellolab / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆59Updated 6 months ago
• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆19Updated 3 months ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆36Updated 2 years ago
• jlakkis / sciPENN
  ☆17Updated 2 years ago
• JiangBioLab / DeepCCI
  ☆21Updated 2 years ago
• SONGDONGYUAN1994 / scDesign3
  scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
  ☆93Updated last month
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆68Updated last year
• mostafavilabuw / EnformerAssessment
  ☆19Updated 8 months ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆80Updated 2 years ago
• SchubertLab / mvTCR
  ☆51Updated 5 months ago
• sallyqus / awesome-AI4SingleCell
  Must-read papers on deep learning based methodology paper for single cell data analysis
  ☆18Updated 4 years ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆56Updated 2 weeks ago
• decomverse / ACTIONet
  ACTIONet single-cell analysis framework
  ☆38Updated 7 months ago
• huidongchen / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆18Updated 11 months ago
• BaiDing1234 / AttentionPert
  ☆14Updated 8 months ago