BGIResearch / BioLLMLinks
☆22Updated 2 months ago
Alternatives and similar repositories for BioLLM
Users that are interested in BioLLM are comparing it to the libraries listed below
Sorting:
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆58Updated last year
- ☆61Updated last month
- ☆31Updated 2 years ago
- ☆49Updated 4 months ago
- ☆43Updated last year
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆58Updated 8 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆54Updated 11 months ago
- ☆59Updated 10 months ago
- single cell foundation model for Gene network inference and more☆90Updated 2 weeks ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆31Updated 3 months ago
- Code for "Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign"☆12Updated 9 months ago
- ☆36Updated last month
- Computational Optimization of DNA Activity (CODA)☆60Updated 3 months ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆70Updated 2 years ago
- GeneCompass☆84Updated last month
- ☆131Updated last year
- Modeling complex perturbations with CellFlow☆64Updated last week
- ☆108Updated last month
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆15Updated 9 months ago
- End-to-end analysis of spatial multi-omics data☆81Updated last week
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 9 months ago
- ☆14Updated 11 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆129Updated 4 months ago
- scDrug: From scRNA-seq to Drug Repositioning☆33Updated 2 years ago
- ☆45Updated last week
- Code for evaluating single cell foundation models scBERT and scGPT☆44Updated 10 months ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆142Updated last year
- Materials and scripts for building cell type encyclopedia table☆19Updated 6 months ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆26Updated 3 weeks ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆100Updated 4 months ago