☆39Dec 31, 2025Updated 2 months ago
Alternatives and similar repositories for BioLLM
Users that are interested in BioLLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆36Jul 29, 2025Updated 7 months ago
- ☆17Jul 12, 2024Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆25Feb 26, 2026Updated 3 weeks ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆42Aug 21, 2024Updated last year
- ☆53Mar 4, 2025Updated last year
- It discovers linear dependent columns and then replaces linear dependent columns with linearly independent columns that span the space o…☆16Jul 4, 2024Updated last year
- Transformer Based Embeddings of Wasserstein Distance☆23Feb 18, 2026Updated last month
- Python Implementation of MetaNeighbor scRNAseq Analysis Method☆10Nov 11, 2025Updated 4 months ago
- ☆19Apr 30, 2025Updated 10 months ago
- ☆13Jul 1, 2021Updated 4 years ago
- MODIG: Integrating Multi-Omics and Multi-Dimensional Gene Network for Cancer Driver Gene Identification based on Graph Attention Network …☆12Dec 27, 2022Updated 3 years ago
- ☆338May 23, 2025Updated 10 months ago
- A Cellular Regulatory Network-Aware Transcriptomics Foundation Model☆36Dec 18, 2025Updated 3 months ago
- An introductory course to eQTL analysis.☆10Jul 11, 2025Updated 8 months ago
- A biologically interpretable graph neural network for multistain computational pathology - CVPR 2025☆26May 28, 2025Updated 9 months ago
- CellPolaris☆13Jan 11, 2026Updated 2 months ago
- ☆65Sep 13, 2024Updated last year
- ☆15Dec 18, 2024Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆157Nov 23, 2025Updated 4 months ago
- A pretrained single cell gene expression language model☆12Jun 6, 2023Updated 2 years ago
- rMETL - realignment-based Mobile Element insertion detection Tool for Long read☆21Aug 13, 2024Updated last year
- Deep learning malware detection system using the EMBER dataset☆11Nov 22, 2024Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆169Feb 25, 2025Updated last year
- scCellFie infers metabolic activities from single-cell and spatial transcriptomics and offers a variety of downstream analyses.☆53Jan 24, 2026Updated last month
- Vector representations of gene co-expression in single cell RNAseq.☆36Nov 8, 2025Updated 4 months ago
- ☆11Jul 8, 2024Updated last year
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- ☆19Dec 20, 2025Updated 3 months ago
- ☆19Aug 29, 2025Updated 6 months ago
- Cross Modality Optimal Transport for multimodal inference☆10Nov 29, 2024Updated last year
- 恶意软件检测系统后端代码☆12Nov 28, 2020Updated 5 years ago
- FastReseg for detection and correction of cell segmentation error based on spatial profile of transcripts.☆13Dec 6, 2025Updated 3 months ago
- ☆43Jun 11, 2022Updated 3 years ago
- An Agentic AI Framework for Ingestion and Standardization of Single-Cell RNA-seq Data Analysis☆46Jan 23, 2026Updated 2 months ago
- Single-cell biological network inference using a heterogeneous graph transformer☆76Feb 24, 2025Updated last year
- ☆13Jun 11, 2024Updated last year
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 3 years ago
- AI-Driven Code Generation, Explanation and Execution for Data Analysis☆23Sep 11, 2024Updated last year