π¬ MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Perfect for automating microscopy workflows and building intelligent image analysis tools.
β41Mar 25, 2026Updated 5 months ago
Alternatives and similar repositories for napari-mcp
Users that are interested in napari-mcp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexiblβ¦β18Apr 5, 2026Updated 4 months ago
- A plugin to read whole slide images within napari.β21Nov 24, 2025Updated 9 months ago
- Annotation of filaments and other curvilinear structures in 3D.β12Oct 9, 2023Updated 2 years ago
- A web-based, time-series visualizer for tracked segmented data.β17Updated this week
- Generate multifunctional and macro recordable GUIs from Python classesβ47Aug 10, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer β’ AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A fully scalable robust image feature extraction library.β29Updated this week
- A napari plugin for zarr backed OME-NGFF imagesβ54Aug 18, 2026Updated last week
- β14Jan 25, 2024Updated 2 years ago
- β27Jan 27, 2026Updated 7 months ago
- A stable diffusion demo for napariβ11Jun 7, 2026Updated 2 months ago
- ilastik plugin for napariβ15Mar 2, 2026Updated 5 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcherβ19Jul 26, 2026Updated last month
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.β46May 1, 2025Updated last year
- β27Aug 21, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.β99Aug 6, 2026Updated 3 weeks ago
- Reference implementation of the Graph Exchange File Formatβ42Updated this week
- Interactive visualization and sharing of cell tracking data in the browserβ48Updated this week
- β39Mar 22, 2024Updated 2 years ago
- Rust extension module for FIJI-like colormapping and channel blendingβ21Jun 24, 2026Updated 2 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.β57Nov 13, 2025Updated 9 months ago
- Multiple file format reading directly into napari using pure Pythonβ38Oct 15, 2025Updated 10 months ago
- Paint segmentations directly to on-disk/remote zarr arraysβ16Mar 25, 2026Updated 5 months ago
- Graph-based framework to manipulate and analyze cell lineages from cell tracking dataβ24Updated this week
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Base implementation of the Multi-Encoder Variational AutoEncoder (ME-VAE)β10Feb 28, 2022Updated 4 years ago
- A Python package for unsupervised analysis of spatial (prote)omics data.β19Jul 23, 2026Updated last month
- Automated batch processing of cell and tissue microscopy image data in Napariβ22Updated this week
- Modern Bio-Formats wrapper with clean lazy Python APIβ23Jun 25, 2026Updated 2 months ago
- Streaming directly to Zarr on the file system or S3β30Updated this week
- Speed up coding/extending image analysis in Python.β37May 9, 2026Updated 3 months ago
- napari widgets for start-to-finish batch processingβ15Jun 1, 2026Updated 2 months ago
- A multi-dimensional spatial image data structure for scientific Python.β44Aug 8, 2025Updated last year
- Whole slide image registration through wsireg in napari.β12Apr 21, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting β’ AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadataβ55Updated this week
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.β18Nov 10, 2022Updated 3 years ago
- A 3D interactivity toolbox for napariβ37Jul 8, 2025Updated last year
- GPU-accelerated Image Processing library for Pythonβ65Aug 20, 2026Updated last week
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datasβ¦β11Oct 24, 2023Updated 2 years ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of imagesβ19Apr 8, 2025Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.β19Dec 9, 2025Updated 8 months ago