microbiota / Zhang2019NBTLinks
Scripts for stat and plot figures in rice microbiome paper
☆20Updated 6 years ago
Alternatives and similar repositories for Zhang2019NBT
Users that are interested in Zhang2019NBT are comparing it to the libraries listed below
Sorting:
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆59Updated 7 months ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆31Updated 6 years ago
- Scripts for stat and plot figures in rice microbiome paper☆30Updated last year
- Microbiome Protocol eBook related documents and scripts.☆49Updated 4 years ago
- A companion R package for the MicrobiomeAnalyst web server☆131Updated last week
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆44Updated 5 years ago
- R implementation of the LEfSe method☆63Updated 2 months ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 6 years ago
- ☆46Updated 5 years ago
- MaAsLin2: Microbiome Multivariate Association with Linear Models☆152Updated last month
- ☆58Updated last year
- A simple plot library☆52Updated 8 years ago
- ☆87Updated last year
- iMeta teaches you to plot☆55Updated 2 years ago
- ☆125Updated 4 years ago
- Statistics and visualization for amplicon data☆72Updated 2 years ago
- Network analysis for multi-omics☆99Updated last month
- Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…☆61Updated 3 years ago
- A comprehensive R package for deep mining microbiome☆190Updated 2 months ago
- 16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo…☆38Updated 4 years ago
- Code and analysis results for the CRC shotgun meta-analysis☆38Updated 3 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆123Updated last year
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆53Updated 2 months ago
- Analysis framework for integrating gut microbiome and host gene expression data☆34Updated 3 years ago
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆117Updated 2 years ago
- Metagenome analysis pipeline☆100Updated 4 years ago
- Statistical Analysis of Metagenomic Profiles☆94Updated this week
- Course material for the metagenomics course☆47Updated 3 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆33Updated 3 years ago
- This is an unofficial repo for Tax4Fun2☆26Updated 3 years ago