Scripts for stat and plot figures in rice microbiome paper
☆20May 12, 2019Updated 7 years ago
Alternatives and similar repositories for Zhang2019NBT
Users that are interested in Zhang2019NBT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A toolbox for working with genome trees.☆10May 20, 2026Updated 4 months ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆13Jun 24, 2023Updated 3 years ago
- Visualize microbiome data with black magic ggtree☆67Sep 3, 2020Updated 6 years ago
- Prediction of Active Enhancers and Promoters in a Cell type specific manner using shape matching of histone and/or DNase-I hypersensitivi…☆19Sep 19, 2018Updated 8 years ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24May 3, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is the supplementary code for CRC-multi-kingdom☆17Nov 8, 2021Updated 4 years ago
- A pipeline for scRNA-seq data analysis☆16Mar 26, 2025Updated last year
- R scripts for performing co-occurrence analyses☆36Jan 7, 2015Updated 11 years ago
- Microbiome research☆22May 24, 2022Updated 4 years ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆32Feb 23, 2018Updated 8 years ago
- Generating iToL annotations from Spreadsheet or CSV files☆108May 15, 2020Updated 6 years ago
- random collection of scripts used to process sequences☆10Jun 30, 2026Updated 3 months ago
- Microbial ecological network visualization clustering☆156Sep 29, 2026Updated 2 weeks ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆31Mar 29, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- dada2 formatted nifH database☆13May 17, 2024Updated 2 years ago
- ☆13Jun 1, 2021Updated 5 years ago
- Statistics and visualization for amplicon data☆74May 21, 2026Updated 4 months ago
- Mandel Lab Protocols☆12Sep 3, 2026Updated last month
- Scripts for stat and plot figures in rice microbiome paper☆30Oct 18, 2024Updated last year
- ☆24Mar 2, 2019Updated 7 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 5 months ago
- Processing support for Greengenes2☆15Jul 31, 2023Updated 3 years ago
- a user-friendly and flexible pipeline for prokaryote genome analysis☆69Sep 29, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 历史文档备份（只包含2019年和2020年）☆205Jul 20, 2021Updated 5 years ago
- Code for the identification step for CSI-Microbes☆31Nov 25, 2024Updated last year
- Identification of differentially methylated genes in biomedical data☆15Jan 26, 2026Updated 8 months ago
- Tools for processing HIC data.☆11May 21, 2021Updated 5 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆12Jan 15, 2021Updated 5 years ago
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆20Apr 8, 2022Updated 4 years ago
- ☆18Jan 12, 2026Updated 9 months ago
- ☆12Oct 10, 2023Updated 3 years ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆88Apr 28, 2026Updated 5 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆10Nov 5, 2023Updated 2 years ago
- ☆13Mar 17, 2019Updated 7 years ago
- supplementary tables and files☆11Oct 13, 2023Updated 3 years ago
- ☆22Aug 1, 2024Updated 2 years ago
- Ontology-aware neural network (ONN) for microbial community sample source tracking!☆10Oct 11, 2022Updated 4 years ago
- ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…☆75Aug 28, 2026Updated last month
- ggplot2 geoms to outline groups of data points☆16Nov 24, 2023Updated 2 years ago