Alternatives and similar repositories for Zhang2019NBT

Users that are interested in Zhang2019NBT are comparing it to the libraries listed below

• GRONINGEN-MICROBIOME-CENTRE / Groningen-Microbiome
  Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…
  ☆59Updated 6 months ago
• YongxinLiu / Zhang2018SCLS
  Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)
  ☆31Updated 6 years ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆49Updated 4 years ago
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆128Updated 3 weeks ago
• YongxinLiu / Zhang2019NBT
  Scripts for stat and plot figures in rice microbiome paper
  ☆30Updated last year
• nearinj / Comparison_of_DA_microbiome_methods
  ☆58Updated last year
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆61Updated 3 weeks ago
• microsud / Tools-Microbiome-Analysis
  A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
  ☆116Updated 2 years ago
• alexa-kur / miQTL_cookbook
  ☆46Updated 5 years ago
• taowenmicro / ggClusterNet
  Microbial ecological network visualization clustering
  ☆133Updated 3 weeks ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆72Updated 2 years ago
• zellerlab / crc_meta
  Code and analysis results for the CRC shotgun meta-analysis
  ☆38Updated 3 years ago
• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆43Updated 5 years ago
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆100Updated 4 years ago
• SegataLab / lefse
  ☆86Updated last year
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆54Updated 2 years ago
• Asa12138 / MetaNet
  Network analysis for multi-omics
  ☆95Updated last week
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆68Updated 5 years ago
• grimmlab / MicrobiomeBestPracticeReview
  Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
  ☆122Updated last year
• FrederickHuangLin / ANCOM-Code-Archive
  Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…
  ☆61Updated 3 years ago
• biobakery / Maaslin2
  MaAsLin2: Microbiome Multivariate Association with Linear Models
  ☆151Updated last year
• cafferychen777 / ggpicrust2
  Make Picrust2 Output Analysis and Visualization Easier
  ☆170Updated last month
• YongxinLiu / Note
  ☆125Updated 4 years ago
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆190Updated last month
• Tong-Chen / s-plot
  A simple plot library
  ☆52Updated 8 years ago
• donovan-h-parks / STAMP
  Statistical Analysis of Metagenomic Profiles
  ☆93Updated 5 years ago
• allenlab / QIIME2_16S_ASV_protocol
  ☆14Updated 4 years ago
• twbattaglia / MicrobeDS
  A repository for large-scale microbiome datasets, formatted for phyloseq
  ☆39Updated last year
• borenstein-lab / mimosa2
  ☆13Updated 11 months ago
• ZihaoShu / Tax4Fun2
  This is an unofficial repo for Tax4Fun2
  ☆26Updated 3 years ago