MGI sequence platform data multiplexing tool
☆12Sep 11, 2019Updated 7 years ago
Alternatives and similar repositories for SplitBarcode
Users that are interested in SplitBarcode are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- barcode demultiplexing☆22Jun 4, 2019Updated 7 years ago
- mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.☆20Updated this week
- BreakID: genomics breakpoints identification to detect gene fusion events using discordant pairs and split read☆12Jun 17, 2020Updated 6 years ago
- Standard analysis routine for samples that were generated with Lexogen's QuantSeq pool library preparation kit.☆12Oct 31, 2022Updated 3 years ago
- Trim adapters from MGI sequence data☆14Jun 11, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11May 14, 2025Updated last year
- Gapless, reference-quality Southern Han Chinese genome assembly and annotation☆12Oct 24, 2022Updated 4 years ago
- This repository contains code related to the publication "Comparative performance of the BGI and Illumina sequencing technology for singl…☆19Oct 12, 2021Updated 5 years ago
- ☆14Mar 11, 2019Updated 7 years ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- Repository with NGSchool2022 materials☆14Sep 19, 2022Updated 4 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Introduction to Programming for Bioinformatics, based on previous GNBF5010 Introduction to Programming course in Chinese University of Ho…☆25Sep 3, 2023Updated 3 years ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆14May 13, 2019Updated 7 years ago
- Calculate confidence scores from Kraken2 output☆25Feb 18, 2024Updated 2 years ago
- A git prompt for bash☆16Feb 19, 2026Updated 8 months ago
- convert from HDF5 matrix format to txt/tab (tsv) matrix format☆10Aug 3, 2016Updated 10 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Oct 23, 2026Updated last week
- Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools☆11Apr 26, 2020Updated 6 years ago
- Copy number estimation of highly duplicated sequences☆12Aug 15, 2017Updated 9 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- Microsatellite instability (MSI) detection for tumor only data.☆116Apr 23, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Paired-seq☆15Jul 17, 2024Updated 2 years ago
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated 11 months ago
- Snakemake Assembly pipeline☆11Jul 15, 2026Updated 3 months ago
- gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API se…☆14Jul 24, 2016Updated 10 years ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated 8 months ago
- My solutions for Ethernaut, https://ethernaut.openzeppelin.com/☆10Aug 20, 2021Updated 5 years ago
- A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files☆116Mar 28, 2024Updated 2 years ago
- A toolset to analyze genomic footprinting data☆21Jul 28, 2026Updated 3 months ago
- PHPQstat is a web interface that allows you to use the commands of the Sun Grid Engine (SGE) batch queue system (and forked projects). Wi…☆17Jan 17, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data☆14Nov 4, 2022Updated 3 years ago
- Some scripts for T-LGLL single cell RNA-seq project☆11Nov 19, 2021Updated 4 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- Son of Grid engine☆18Dec 19, 2024Updated last year
- ☆17Jun 17, 2021Updated 5 years ago
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago