MartinThoma / propy3Links
A Python 3 version of the protein descriptor package propy
☆46Updated 2 years ago
Alternatives and similar repositories for propy3
Users that are interested in propy3 are comparing it to the libraries listed below
Sorting:
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆76Updated 3 years ago
- ☆73Updated 5 years ago
- pyFoldX: python bindings for FoldX.☆51Updated 4 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- ☆87Updated 3 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Biosynthesis Navigator for Natural Products☆52Updated 3 years ago
- ☆50Updated 2 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆81Updated last week
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆52Updated 4 months ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆40Updated 11 months ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆55Updated 11 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- ☆35Updated 4 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Updated 4 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 5 years ago
- Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.☆61Updated last week
- Code for our paper "Protein sequence design with a learned potential"☆80Updated 2 years ago
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 5 years ago
- DeepAAI☆35Updated 10 months ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- Antibody Binding Mutational Database☆36Updated 6 years ago
- ☆74Updated last year
- PyDock Tutorial☆34Updated 7 years ago
- Diffusion model based protein-ligand flexible docking method☆114Updated last year