KeatingLab / PixelDB
☆13Updated 7 years ago
Alternatives and similar repositories for PixelDB:
Users that are interested in PixelDB are comparing it to the libraries listed below
- PyDock Tutorial☆30Updated 6 years ago
- ☆25Updated 6 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 7 months ago
- An antibody-specific language model focusing on NGL prediction☆25Updated 6 months ago
- Making Protein folding accessible to all!☆21Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆15Updated last year
- Some Rosetta Scripts that allow for various simple tasks☆13Updated 5 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆22Updated 5 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆24Updated 7 months ago
- Automated construction of protein chimeras and their analysis.☆14Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 11 months ago
- ☆19Updated 8 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 8 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- ☆20Updated 2 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆43Updated 2 weeks ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆16Updated 3 years ago
- De novo design of small molecule binding sites into proteins☆13Updated 3 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 2 years ago
- ☆19Updated 2 years ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆28Updated 2 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆17Updated last year
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 2 years ago
- ☆17Updated 5 months ago
- This script can clean up the disordered region in the AlphaFold DB structures to adapt it to the molecular docking, extract the sequence …☆14Updated last year
- ☆19Updated last year
- pyFoldX: python bindings for FoldX.☆44Updated 3 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆32Updated 3 years ago