Alternatives and similar repositories for PixelDB

Users that are interested in PixelDB are comparing it to the libraries listed below

• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆27Updated 4 years ago
• haddocking / binding-affinity-benchmark
  Protein-protein binding affinity benchmark
  ☆15Updated 7 months ago
• DeepRank / iScore
  iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…
  ☆31Updated 3 years ago
• JosePereiraUA / rosetta-scripts
  Some Rosetta Scripts that allow for various simple tasks
  ☆14Updated 5 years ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 3 years ago
• compbiomed-unito / acdc-nn
  ☆21Updated 2 years ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• Hoecker-Lab / protlego
  Automated construction of protein chimeras and their analysis.
  ☆15Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated last month
• ba-lab / disteval
  DISTEVAL: A web-server for evaluating protein inter-residue distances
  ☆18Updated 3 years ago
• wendao / CAGE-Prox
  Computer aided proximal decaging as a universal strategy for temporal protein activation
  ☆24Updated 3 months ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 2 months ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• samgoldman97 / enz-pred
  ☆17Updated 3 years ago
• strauchlab / iNNterfaceDesign
  ☆20Updated 2 years ago
• haddocking / HADDOCK-antibody-antigen
  Material to run the HADDOCK antibody-antigen modelling protocol
  ☆22Updated last year
• Wang-Lin-boop / PPI-Miner
  A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design
  ☆19Updated 7 months ago
• sun-heqi / MultiPPIMI
  A deep learning framework for predicting interactions between protein-protein interaction targets and modulators
  ☆14Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆21Updated last year
• jaaamessszzz / BindingSitesFromFragments
  De novo design of small molecule binding sites into proteins
  ☆12Updated 4 years ago
• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 3 months ago
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆14Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• ak422 / DDAffinity
  ☆22Updated 3 months ago
• kiharalab / NuFold
  NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation
  ☆46Updated 2 months ago
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆32Updated 6 years ago
• lijunRNA / RNA3DCNN
  to assess structural quality of RNA using 3D CNN
  ☆13Updated 7 years ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆33Updated 7 years ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆36Updated 3 months ago