KeatingLab / PixelDBLinks
☆13Updated 8 years ago
Alternatives and similar repositories for PixelDB
Users that are interested in PixelDB are comparing it to the libraries listed below
Sorting:
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago
- Protein-protein binding affinity benchmark☆16Updated 8 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- ☆27Updated 2 weeks ago
- to assess structural quality of RNA using 3D CNN☆13Updated 7 years ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- PyDock Tutorial☆34Updated 7 years ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 5 months ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Updated 4 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- ☆22Updated 2 years ago
- This script can clean up the disordered region in the AlphaFold DB structures to adapt it to the molecular docking, extract the sequence …☆14Updated 2 years ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 8 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Updated 4 years ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Updated 4 years ago
- ☆25Updated 2 months ago
- test☆14Updated 4 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆21Updated last year
- Scores for Hydrophobicity and Charges based on SASAs☆37Updated 4 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- ☆17Updated 3 years ago
- MpbPPI: A multi-task pre-training-based equivariant approach for the prediction of the effect of amino acid mutations on protein-protein …☆17Updated last year
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆20Updated 11 months ago
- Docking Tool Benchmarking Workflow☆24Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago