Single-cell epigenomic data annotation via supervised non-linear embedding
☆24Apr 14, 2022Updated 4 years ago
Alternatives and similar repositories for EpiAnno
Users that are interested in EpiAnno are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A deep convolutional neural network for the accurate prediction of silencers☆16May 23, 2023Updated 3 years ago
- stPlus: reference-based enhancement of spatial transcriptomics☆20Jan 6, 2024Updated 2 years ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆19Oct 17, 2024Updated last year
- Supervised cell type identification for scATAC-seq data☆15Aug 23, 2023Updated 3 years ago
- DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning☆20Jul 23, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a unified single-cell data integration framework by optimal transport☆39Aug 23, 2026Updated 3 weeks ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆33Nov 14, 2022Updated 3 years ago
- Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)☆11May 3, 2025Updated last year
- A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …☆26Jan 31, 2026Updated 7 months ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆13Apr 21, 2021Updated 5 years ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- ☆19Jul 31, 2021Updated 5 years ago
- A Logitech Lua Script for Anti recoil(Mostly)☆10Mar 1, 2025Updated last year
- Scasat is a single cell ATAC-seq preprocessing and analysis pipeline☆35Feb 27, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- ☆10Apr 4, 2024Updated 2 years ago
- ☆13Apr 27, 2020Updated 6 years ago
- A foundation model for single-cell epigenomic data☆72Jun 3, 2026Updated 3 months ago
- C++ functions for reading and writing .pfm images to and from opencv Mat object☆12Jul 9, 2015Updated 11 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆78Feb 24, 2025Updated last year
- A simple application to build Trip-lets☆11Mar 30, 2020Updated 6 years ago
- ☆11Jun 4, 2021Updated 5 years ago
- ☆13Nov 8, 2022Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆68Jul 13, 2023Updated 3 years ago
- Perform stereo matching algorithm using Direct 3D (level 9.3) on a mobile device without CUDA support.☆14Sep 11, 2018Updated 8 years ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆38Feb 14, 2025Updated last year
- ☆20Feb 23, 2022Updated 4 years ago
- Single-cell ATAC-seq analysis via Latent feature Extraction☆105Aug 23, 2023Updated 3 years ago
- ☆15Dec 18, 2021Updated 4 years ago
- ☆15Nov 9, 2018Updated 7 years ago
- Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq da…☆16May 15, 2023Updated 3 years ago
- Code relevant to sci-ATAC-seq of Drosophila embryogenesis.☆22Jun 9, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated 3 weeks ago
- ☆14Jan 16, 2019Updated 7 years ago
- ☆19Jul 10, 2025Updated last year
- Single cell epigenomic clustering based on accessibility pattern☆24Nov 9, 2022Updated 3 years ago
- ☆12Updated this week
- Novel joint clustering method with scRNA-seq and CITE-seq data☆11Jun 22, 2021Updated 5 years ago
- Code release for Universal Multi-Source Domain Adaptation for Image Classification (Pattern Recognition)☆14Sep 30, 2022Updated 3 years ago