Alternatives and similar repositories for informatics-playbook

Users that are interested in informatics-playbook are comparing it to the libraries listed below

• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆24Updated 3 weeks ago
• National-Clinical-Cohort-Collaborative / Data-Ingestion-and-Harmonization
  Data Ingestion and Harmonization
  ☆45Updated 2 months ago
• geneontology / helpdesk
  The Gene Ontology Helpdesk
  ☆16Updated 5 months ago
• monarch-initiative / monarchr
  R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.
  ☆14Updated last month
• LHNCBC / CRI
  Clinical Research Informatics
  ☆13Updated last year
• opentargets-archive / data_pipeline
  Code for the data processing pipeline
  ☆17Updated 4 years ago
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆31Updated last year
• NCATSTranslator / ReasonerAPI
  NCATS Biomedical Translator Reasoners Standard API
  ☆37Updated last month
• cthoyt / doctoral-thesis
  📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
  ☆29Updated 5 years ago
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆19Updated 2 months ago
• logicahealth / solor-doc
  Documentation for Solor Knowledge Architecture and Knowledge Management Environment
  ☆17Updated 2 years ago
• geneontology / obographs
  Basic and Advanced OBO Graphs: specification and reference implementation
  ☆66Updated 6 months ago
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated 2 months ago
• TheJacksonLaboratory / loinc2hpoAnnotation
  loinc2hpo Annotation Data
  ☆24Updated 2 years ago
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆41Updated last year
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆14Updated 2 months ago
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated last year
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 3 weeks ago
• OntoGene / OGER
  ☆24Updated 4 years ago
• monarch-initiative / HpoTextMining
  Perform text mining for identification of HPO terms in free text from scientific publication.
  ☆12Updated last year
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 3 years ago
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• biocaddie / WG3-MetadataSpecifications
  WG3 Metadata Specification
  ☆28Updated 6 years ago
• biobanking / biobanking
  Ontology for Biobanking
  ☆16Updated last month
• Novartis / ontobrowser
  OntoBrowser is a web-based application for managing ontologies
  ☆42Updated 2 years ago
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated 3 months ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆33Updated last year
• NUSCRIPT / OMOP_to_Graph
  Transform the OMOP model to graph model
  ☆22Updated 7 months ago
• fusion-jena / computational-reproducibility-pmc
  ☆11Updated 7 months ago
• biolink / biolinkml
  DEPRECATED: replaced by linkml
  ☆23Updated 4 years ago