UNet script, model, sample data
☆14Feb 19, 2025Updated last year
Alternatives and similar repositories for UnMicst
Users that are interested in UnMicst are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Apr 8, 2025Updated 11 months ago
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated last year
- ☆13Dec 1, 2023Updated 2 years ago
- A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …☆25Jan 31, 2026Updated last month
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆48Jul 16, 2024Updated last year
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆24Sep 29, 2025Updated 5 months ago
- Python API and Jupyter widget for Vitessce☆62Mar 16, 2026Updated last week
- ☆28Jun 24, 2025Updated 9 months ago
- NuLite - Lightweight and Fast Model for Nuclei Instance Segmentation and Classification☆33Jan 19, 2026Updated 2 months ago
- version 1 scripts for CODA☆60May 7, 2024Updated last year
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆31Feb 12, 2026Updated last month
- Official repository for Characterization of tumor heterogeneity through segmentation-free representation learning on multiplexed imaging …☆15Sep 28, 2025Updated 5 months ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Sep 17, 2021Updated 4 years ago
- Automatically use the latest “vX.X.X” tag as version in your Python package☆13Mar 16, 2026Updated last week
- Supervised cell type identification for scATAC-seq data☆14Aug 23, 2023Updated 2 years ago
- Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information …☆39May 7, 2024Updated last year
- pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch☆10Feb 12, 2023Updated 3 years ago
- ☆13Nov 8, 2022Updated 3 years ago
- Talking Graphs: Your Data Speaks Up☆17Jan 23, 2024Updated 2 years ago
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated 9 months ago
- ☆10Nov 5, 2020Updated 5 years ago
- Few-Shot Object Detection with Transformer☆10Jan 3, 2024Updated 2 years ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 2 weeks ago
- ☆15Nov 9, 2018Updated 7 years ago
- A tensorflow implementation of the Forward-Forward Algorithm from NeurIPS '22.☆10May 10, 2023Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- MultiscaleGraphSignalTransforms.jl is a collection of software tools written in the Julia programming language for graph signal processin…☆12Mar 15, 2026Updated last week
- ☆13Apr 4, 2023Updated 2 years ago
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Unofficial implemetation of BCDU-Net with PyTorch and Keras☆12May 29, 2023Updated 2 years ago
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- JS/WASM build of CharLS☆14Feb 2, 2026Updated last month
- Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis☆10Apr 25, 2025Updated 10 months ago
- Regression modeling of sub-distribution functions in competing risks☆14Aug 2, 2023Updated 2 years ago
- ☆12Mar 1, 2026Updated 3 weeks ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆10Jun 22, 2021Updated 4 years ago
- General Image Analysis of Nuclei-containing Images☆10Jul 11, 2025Updated 8 months ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆56Jun 25, 2025Updated 8 months ago