Provides easy read/write access to genomic tracks
☆22Mar 18, 2016Updated 10 years ago
Alternatives and similar repositories for track
Users that are interested in track are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Sep 24, 2013Updated 12 years ago
- Concordance between variant callers☆17Nov 27, 2014Updated 11 years ago
- Interactive web-based genome browser.☆229Aug 28, 2019Updated 6 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- Metagenomics-focused BAM file manipulation☆15Jul 8, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Ruby UCSC API: An API for the UCSC Genome Database☆19Jul 21, 2022Updated 4 years ago
- Log command line events to a graph database :)☆13Mar 12, 2016Updated 10 years ago
- Use somatic mutations to choose a personalized cancer vaccine (tumor-specific immunogenic peptides)☆16Sep 23, 2016Updated 9 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Jan 13, 2015Updated 11 years ago
- A Swiss army knife for genome projects☆15Aug 13, 2013Updated 12 years ago
- The gkno launcher for executing tools or pipelines☆31Jan 17, 2017Updated 9 years ago
- 1,895 Git aliases and scripts☆29May 11, 2026Updated 2 months ago
- visualization tools for exon/junction coverage☆11Dec 30, 2019Updated 6 years ago
- RNA-Skim: a rapid method for RNA-Seq quantification at transcript level☆19Sep 3, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- Bayesian Markov Model motif discovery - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by…☆20Oct 5, 2017Updated 8 years ago
- python access to UCSC genomes database☆138Aug 27, 2020Updated 5 years ago
- A simple and performant API for working with many genomic file formats in a consistent fashion☆16Mar 23, 2018Updated 8 years ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Mar 3, 2017Updated 9 years ago
- example ruffus pipeline☆18Sep 30, 2011Updated 14 years ago
- A powerful toolset for genome arithmetic.☆143May 28, 2021Updated 5 years ago
- Chromatin domains bursting with flavor☆12Dec 29, 2019Updated 6 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Process management library☆18Aug 17, 2022Updated 3 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- https://bam.iobio.io☆47Jun 15, 2026Updated last month
- Benchmarking toolkit for variant calling☆48Oct 13, 2020Updated 5 years ago
- ☆10Aug 29, 2012Updated 13 years ago
- vcf file manipulation☆22Jul 9, 2015Updated 11 years ago
- Basic notebook checks. Do they run? Do they contain lint?☆17Sep 26, 2025Updated 9 months ago
- BEETL☆98Apr 15, 2023Updated 3 years ago
- package manager for datasets☆60Mar 18, 2015Updated 11 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Genoogle is a software for fast similar DNA sequence searching. It is a full functional similar genetics searching tool, having a text mo…☆13Apr 27, 2016Updated 10 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 3 years ago
- A python library for checking if an email is issued by an academic institution. Useful for granting discounts, etc to academic users.☆15Feb 16, 2016Updated 10 years ago
- Tools for next-generation sequencing analysis☆89Jun 25, 2019Updated 7 years ago
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Sep 24, 2013Updated 12 years ago
- MedSavant is a search engine for genetic variants☆22Apr 21, 2016Updated 10 years ago
- Genotype + Environment = Trait Evidence (GET-E) Database: help the Personal Genome Project, the clinical genetics community, and, the gen…☆26Oct 23, 2012Updated 13 years ago